PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01101.1.g00120.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 639aa MW: 69413 Da PI: 8.525

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01101.1.g00120.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	67.7	1.8e-21	475	533	2	57
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 dDg++WrKYG K + ++ + r Y+rC+++ gC +kk+v++++edp+++++tY geH+ Zmw_sc01101.1.g00120.1.am.mk 475 DDGFAWRKYGEKIISDQWYQRFYFRCSYRdehGCGAKKQVQQTQEDPSLFQTTYFGEHT 533 8*************************99999***********************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.1E-22	468	534	IPR003657	WRKY domain
PROSITE profile	PS50811	20.426	469	537	IPR003657	WRKY domain
SuperFamily	SSF118290	5.1E-22	472	536	IPR003657	WRKY domain
SMART	SM00774	3.9E-29	474	538	IPR003657	WRKY domain
Pfam	PF03106	2.8E-21	475	533	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence Send to blast
MSTRPKSETV SPPPPSPRAT SNQRDAAIQE LRRVSHLAAK LRQQLELIPE VDRLEAAADN 60 VSEIADAMES SLSILQSASE QYYSSEAGAM AMALPAVHSS DGSTGASRIA VPRARKVRHG 120 RGRLGEEVPM LYYKCSYSDD HKCPAKKYVP QHNNSDPPQE EGREGKRQLI PVRGERERES 180 AEAAGEGRAS ERDRPGDPAA PLVPAGLSTD AGRFPAARFR TPNANHFDSH GVMAAARPRP 240 AARRCRHGRP VAPCDPPRSG HAPRPKPTVT VPRRDGCSCP EQSCGVPTDE LIVMYPKGTT 300 ARLSTEGEVT VLARSPRNGE VLAWGTLTQM PIDLLRTERQ HVCQQSARII SAARRRIRRS 360 TKKPRTCPSD LARKMATTAE STSAACELVA GAREPAVRLL ALLQAIDADP DKQSLAKQII 420 RCIDRALAAV RGAGDDKKRR PPAHGPTTRP PAGSSKRRVT GRGETGARVV SSTIDDGFAW 480 RKYGEKIISD QWYQRFYFRC SYRDEHGCGA KKQVQQTQED PSLFQTTYFG EHTPACPRDD 540 APVAVVDRTS VPQVPFLASS SVGAGNDSLC HGDDEAPPSL PVKAELMQAN VAEFTEDCPV 600 DDRLMKWASA DVSFASPASV GLESLDGLEE LISLLWSGD

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence Send to blast

MSTRPKSETV SPPPPSPRAT SNQRDAAIQE LRRVSHLAAK LRQQLELIPE VDRLEAAADN  60
VSEIADAMES SLSILQSASE QYYSSEAGAM AMALPAVHSS DGSTGASRIA VPRARKVRHG  120
RGRLGEEVPM LYYKCSYSDD HKCPAKKYVP QHNNSDPPQE EGREGKRQLI PVRGERERES  180
AEAAGEGRAS ERDRPGDPAA PLVPAGLSTD AGRFPAARFR TPNANHFDSH GVMAAARPRP  240
AARRCRHGRP VAPCDPPRSG HAPRPKPTVT VPRRDGCSCP EQSCGVPTDE LIVMYPKGTT  300
ARLSTEGEVT VLARSPRNGE VLAWGTLTQM PIDLLRTERQ HVCQQSARII SAARRRIRRS  360
TKKPRTCPSD LARKMATTAE STSAACELVA GAREPAVRLL ALLQAIDADP DKQSLAKQII  420
RCIDRALAAV RGAGDDKKRR PPAHGPTTRP PAGSSKRRVT GRGETGARVV SSTIDDGFAW  480
RKYGEKIISD QWYQRFYFRC SYRDEHGCGA KKQVQQTQED PSLFQTTYFG EHTPACPRDD  540
APVAVVDRTS VPQVPFLASS SVGAGNDSLC HGDDEAPPSL PVKAELMQAN VAEFTEDCPV  600
DDRLMKWASA DVSFASPASV GLESLDGLEE LISLLWSGD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6ir8_A	2e-14	469	533	3	67	OsWRKY45

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP18697	6	9