PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01220.1.g00190.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 169aa    MW: 18303.3 Da    PI: 9.9319
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01220.1.g00190.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.2e-3092149359
                                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                     D y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+  +p ++++tYeg+H+h+
  Zmw_sc01220.1.g00190.1.sm.mkhc  92 DDYSWRKYGQKPIKGSPYPRGYYKCSTVhGCPARKHVERDPGEPAMLIVTYEGDHRHD 149
                                     99***********************9888****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105333.8E-175588IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.2E-3179149IPR003657WRKY domain
PROSITE profilePS5081130.485151IPR003657WRKY domain
SuperFamilySSF1182902.75E-2686150IPR003657WRKY domain
SMARTSM007741.5E-3490150IPR003657WRKY domain
PfamPF031061.1E-2592148IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MDAAFSASAS SSHPSTTLVS FTVTAGGEGS VSGGYRALFQ SASDRARSEN DDGAGGKPRG  60
GRCHCSKKRK PRVKKVIRVP AISSRNADIP PDDYSWRKYG QKPIKGSPYP RGYYKCSTVH  120
GCPARKHVER DPGEPAMLIV TYEGDHRHDA RPAPDQGIER HAGVDSDRH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-2178152275WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts, when in complex with WRKY71, specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Represses specifically gibberellic acid (GA)-induced promoters in aleurone cells, probably by interfering with GAM1. {ECO:0000250|UniProtKB:Q0JEE2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells (By similarity) (PubMed:15618416). Accumulates in response to uniconazole, a gibberellic acid (GA) biosynthesis inhibitor (By similarity). Repressed by GA (PubMed:15618416). {ECO:0000250|UniProtKB:Q0JEE2, ECO:0000269|PubMed:15618416}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008645677.18e-62WRKY transcription factor WRKY51 isoform X2
SwissprotQ6IEN12e-52WRK51_ORYSI; WRKY transcription factor WRKY51
TrEMBLA0A1Z5RMC81e-61A0A1Z5RMC8_SORBI; Uncharacterized protein
TrEMBLA0A3L6EIL91e-61A0A3L6EIL9_MAIZE; Putative WRKY transcription factor 11
STRINGSb04g016540.17e-63(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171