PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01253.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 249aa MW: 27527.4 Da PI: 10.402

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01253.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.1	1.9e-13	120	163	3	46
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 e +r rrk++NRe+ArrsR+RK++ ++ L v +L+ +Nk+L Zmw_sc01253.1.g00020.1.am.mk 120 ENRRKRRKESNRESARRSRLRKQQHLDGLNSQVNQLTDQNKQLG 163 5689*************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	9.5E-11	115	163	No hit	No description
SMART	SM00338	1.3E-12	118	182	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.749	120	162	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.0E-10	120	162	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.62E-10	122	171	No hit	No description
CDD	cd14702	2.64E-17	123	171	No hit	No description
PROSITE pattern	PS00036	0	125	140	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence Send to blast
MLPREPWLLT CVAAARSTHN ASLPPRGKQQ RTAHVSFFCA ILLSLREPGS SKRFSLCDFF 60 FLKFMLLLAL SEHLLLGGSS MIGSSITRLV QSFSVVFLHC LGTGSSRSSE DGVNLQAQME 120 NRRKRRKESN RESARRSRLR KQQHLDGLNS QVNQLTDQNK QLGVALRVTS QNLVAVQAQN 180 SVLQTQKLEL ESRLGSLADF LLCLNPGTTA STGSAANSAV MNDSLMTTTS GACTWSQPVD 240 LYHHHHQCF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	127	RKRRKE
2	134	140	RRSRLRK
3	134	141	RRSRLRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003577967.1	2e-50	bZIP transcription factor 44
TrEMBL	A0A0A9GYA3	1e-52	A0A0A9GYA3_ARUDO; Uncharacterized protein
STRING	Pavir.Ba02250.1.p	3e-52	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3740	32	76