PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01253.1.g00100.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 254aa MW: 27915.5 Da PI: 6.4389

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01253.1.g00100.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	44.1	4.4e-14	46	84	1	39
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39 ++rlrWt++LHerFveav+qLGG++k ++i e++k++ Zmw_sc01253.1.g00100.1.sm.mkhc 46 RQRLRWTNDLHERFVEAVTQLGGPDKIQASKISEALKLQ 84 58************************9999999988765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	5.55E-5	45	81	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	5.5E-12	45	83	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	8.0E-10	47	83	IPR006447	Myb domain, plants
Pfam	PF14379	1.3E-23	76	120	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence Send to blast
MHSTKPEASF GQAHTDSVIN QQQMVLAGND MGPSNGANSN TNMAARQRLR WTNDLHERFV 60 EAVTQLGGPD KIQASKISEA LKLQMEVQKR LHEQLEVQRQ LQLRIEAQGK YLEKIIEEQR 120 RFSGVKPEMP LAGASVTVSS NEQFPDSERT EPSTPAPKSE SPTQGASNRD NGGRTEAPKS 180 PSHDDSLSHH EPLTPDSNHQ PGSPTASPNH ERAAKRQRAS STEFSQGDCS LTGHIFESSS 240 GSEFQQYSMS YSGH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001152613.1	1e-107	MYB-CC type transfactor
Refseq	XP_023156307.1	1e-107	MYB-CC type transfactor isoform X1
Swissprot	Q9SJW0	8e-40	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A1D6I1M9	1e-122	A0A1D6I1M9_MAIZE; Myb family transcription factor PHL7
STRING	GRMZM2G173943_P02	1e-106	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2220	38	96