PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01254.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 131aa MW: 15283.7 Da PI: 11.0006

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01254.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	40.1	7.4e-13	13	55	10	52
RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + + ++++kdAA eLg+ LK C +G++RWP k++sl Zmw_sc01254.1.g00010.1.am.mk 13 VLAVLHMHLKDAADELGITICHLKFVCHSNGLHRWPGKKVRSL 55 55678************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.661	1	75	IPR003035	RWP-RK domain
Pfam	PF02042	1.2E-10	12	55	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence Send to blast
MPRRGPSPPW SDVLAVLHMH LKDAADELGI TICHLKFVCH SNGLHRWPGK KVRSLNARLD 60 RLIREAAMDQ TSLGTLPRWA DHRRRTLSKI AQVIRELDNI YERIRNPVPE LPAPEPEFDR 120 QGWSVRRYPR K

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP18443	5	9