PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01270.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 481aa    MW: 51316.9 Da    PI: 8.1206
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01270.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.67.2e-08165226258
                           NAM   2 ppGfrFhPtdeelvveyLkkk.vegkklelee....vikevdiykvePwdLpkkvkaeekew 58 
                                   p G+rF+Pt  el+ +yL++  v+g   +++e    +++ +d+y ++P  L ++++ + ++ 
  Zmw_sc01270.1.g00090.1.am.mk 165 PLGYRFNPTPAELIRFYLNPWdVAGGGKTTAEpfpgIVSVADVYATDPDALTARFQDSGTKA 226
                                   89*****************9866665533323343255666**********97666555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-10158314IPR003441NAC domain
PROSITE profilePS5100514.843164314IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MRPQMNVEQP VQPQEQGRKG RESEISYRSK ASWSFGVGGP SGLNAGSAVV ATEAEGGDGA  60
LGVRHQGRRL ATARRAVLLL PHLGRSRAPS ASSPPPPSLR YGRGRSFSFF SVKGSTRGLV  120
REEGQTSPAC LSDANPASPT KPTDSTTNTT RRDHDTTVHR RPCVPLGYRF NPTPAELIRF  180
YLNPWDVAGG GKTTAEPFPG IVSVADVYAT DPDALTARFQ DSGTKAPGTS SASRGGRAGR  240
RLGRGSTAAS KAVAPGTARP AGRPSAWTDT ARASSTAPRG TGRRPAWIME EFLTNLEEAS  300
DGEGVKVVCR VRRSPRAPTP ENEEQETNKV GDMMPRLQGE YEYAVNTRVK RARLDGEHNG  360
LAACSVSVAP SPPPELIGCH YAGTSQEAAG SATWQLLMME QGMGVDGAGG VDIIDRETRL  420
QGLPLPTCKD YSIAQMGLQL NEEWWNSPDF LAWTTDNGVE GGDDPTAQLD NYQREDSAST  480
A
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2489422