PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01288.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 239aa    MW: 25248.3 Da    PI: 4.8366
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01288.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-183281255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  Zmw_sc01288.1.g00070.1.sm.mk 32 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 81
                                  69****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.9E-303189IPR001471AP2/ERF domain
PROSITE profilePS5103221.5753289IPR001471AP2/ERF domain
CDDcd000181.58E-173291No hitNo description
SMARTSM003804.0E-343295IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-193290IPR016177DNA-binding domain
PfamPF008475.3E-113281IPR001471AP2/ERF domain
PRINTSPR003675.7E-93344IPR001471AP2/ERF domain
PRINTSPR003675.7E-95571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MVKNAQLQAE AAINGAAGNA AAARQQHGGK RQYKGVRMRS WGSWVSEIRA PNQKTRIWLG  60
SYSTAEAAAR AYDAALLCLK GSAADLNFPV HLPFHIPAAA MSPKSIQRVA AAAAANACSP  120
LQQGAGPASY PAAAAAINDA ASHPPCGYGV DSASWGVSSP ETVITDHQYC ETMMARDDGT  180
MGDVDYGSLA DIEAFLFQSP KCMEYGMMDP CSTFFAPAPM AADWEEEGEI DLWSFSSCN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1426891172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002454612.14e-93ethylene-responsive transcription factor ERF014
TrEMBLC5XSW49e-92C5XSW4_SORBI; Uncharacterized protein
STRINGSb04g034290.11e-92(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469