PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01313.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NF-YC

Protein Properties

Length: 131aa MW: 15086.6 Da PI: 7.265

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01313.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	31.6	3.4e-10	77	131	3	55
NF-YC 3 ksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfi 55 + fw ++ ie +df ++++P +r+kk++ a++ +m++ ++P +l+k+ce+f+ Zmw_sc01313.1.g00070.1.sm.mk 77 EEFWRNRkeeIEMIEDFGERAIPTTRLKKVIGAEK-GNMMTFDTPSFLAKSCEIFV 131 68999876669999***************9875.6999************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence Send to blast
MVLVDFKAQA LATSSVLPLW LPLDAEDRRS HSTNWTFIFT LDNEVTFARL MKKMNRPLSI 60 CTSPKMSVPG IQIQIIEEFW RNRKEEIEMI EDFGERAIPT TRLKKVIGAE KGNMMTFDTP 120 SFLAKSCEIF V

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025805706.1	1e-25	nuclear transcription factor Y subunit gamma-like
TrEMBL	A0A2T7E605	1e-23	A0A2T7E605_9POAL; Uncharacterized protein
STRING	Pavir.Ca00329.1.p	3e-23	(Panicum virgatum)
STRING	Sb08g006350.1	3e-23	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9174	21	45