PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01357.1.g00150.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 185aa MW: 19885.9 Da PI: 8.7519

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01357.1.g00150.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.7	1.3e-23	14	58	2	46
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+h+ Zmw_sc01357.1.g00150.1.sm.mk 14 PRMRWTSTLHSRFVHAVELLGGHERATPKSVLELMDVKDLTLAHM 58 9*****************************************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	5.2E-9	11	57	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.5E-19	12	58	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.4E-15	14	57	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence Send to blast
MPRLPASRRG MRAPRMRWTS TLHSRFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHMYR 60 TVKSTDKPAT FSGPIDGGGS GDEDLQNAEQ AQSAGDINRQ PFAAHQSASS EGATSQAGGG 120 DLECSSADDS DGSRARSTSS RMSQNLADQL ACSRYPTKKW EALAWSSRWG DQTGTGKNMT 180 SSAKN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015696540.1	4e-56	PREDICTED: probable transcription factor RL9
TrEMBL	A0A3L6RKZ8	4e-55	A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRING	Pavir.Fb00812.1.p	4e-62	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP33646	3	4