PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01411.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 311aa MW: 33301.1 Da PI: 10.7599

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01411.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	34.5	4.4e-11	191	213	4	26
zf-Dof 4 kalkcprCdstntkfCyynnysl 26 + l+cprC s++tkfCy+nny+ Zmw_sc01411.1.g00030.1.am.mk 191 EPLPCPRCGSRETKFCYFNNYNX 213 5789*****************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-7	191	212	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.7E-8	192	213	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence Send to blast
MRVSIIFVLH LSSIRRKNEE GYLLVTLTEI VRIRRLNKTL SPGTGSFVDS ADPHKNLDQH 60 ETSRDQSIII HDKAAPTKVK RLYMIQRDDH LHLLHSLFPR IKAAGVPNDA SLLPFGSMDA 120 DAAGFKLFGK VIQPPDAHQR AAEESVATPP PPPPPPPESM TPSQTLPTLP SSLPAAAAAA 180 AAPSAAGGTG EPLPCPRCGS RETKFCYFNN YNXXXXSAAP AAATGRPAAR SAASLPPPPA 240 AAGRAPPPRD RPLQRPTLSP RQRPPPPPPM KGAVSVDSRS STRGSRMRDT MPPDPAPCVS 300 DWTVGLRPRR A

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14716	16	20