PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01415.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 207aa    MW: 22683.3 Da    PI: 10.8531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01415.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.81.1e-124388756
                           AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                                  r+++ +grW+Ae+r p++   r r ++g+f t++eAa a++aa  +++ge
  Zmw_sc01415.1.g00040.1.sm.mk 43 RRRE-WGRWAAELRMPRK---RERLWIGTFATPKEAAHAYDAAIFCFYGE 88
                                  5555.**********954...5**********************999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.2E-1838105IPR001471AP2/ERF domain
PROSITE profilePS5103220.2713899IPR001471AP2/ERF domain
PRINTSPR003674.5E-63950IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-153999IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-2140100IPR001471AP2/ERF domain
CDDcd000182.52E-1840101No hitNo description
PfamPF008475.8E-84387IPR001471AP2/ERF domain
PRINTSPR003674.5E-66177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MAATALSSSG AATKGKKARR RRGRRSSAMT MAMPKNLGWV GARRREWGRW AAELRMPRKR  60
ERLWIGTFAT PKEAAHAYDA AIFCFYGEHI PKIRKLNFPT APRPDIPEHV RVRLTMANIR  120
AIAEKYAHAL TNYIPPPPPP VVPEAAPQVV VVVPPPVDAS IGSAPTANYG NVNEAGVDIL  180
TVADCLLSFN PDDLTKSCAL RIPPDRS
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555