PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01415.1.g00150.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GATA
Protein Properties Length: 343aa    MW: 37374.3 Da    PI: 9.3771
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01415.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.75.1e-16249283135
                          GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                   C +C + kT +WR gp g+ktLCnaCG++y++ +l
  Zmw_sc01415.1.g00150.1.am.mk 249 CPHCASEKTQQWRTGPLGPKTLCNACGVRYKSGRL 283
                                   9******************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF511973.16E-442151No hitNo description
Gene3DG3DSA:2.60.120.3304.3E-472152IPR027443Isopenicillin N synthase-like
PROSITE profilePS5147111.26224134IPR005123Oxoglutarate/iron-dependent dioxygenase
PfamPF031713.2E-2046133IPR005123Oxoglutarate/iron-dependent dioxygenase
SuperFamilySSF577162.8E-11242294No hitNo description
SMARTSM004012.2E-14243293IPR000679Zinc finger, GATA-type
PROSITE profilePS5011410.106247279IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.102.0E-11247281IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.29E-10248291No hitNo description
PfamPF003204.4E-14249283IPR000679Zinc finger, GATA-type
PROSITE patternPS003440249274IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MRFWPDKPAE FRWTLDRYSA AVKDVAHCLL GIMSKNLGLD SLEPGAHKVV GFAPHSDSDL  60
LTLVLQVNEV QGLQIRGRRG DGRWVPVKPV EGALVVNVGD IFEILTNGRY RSIEHRTVIN  120
REKERLSVAA FHSTSVHAII GPLREIMAHG EDALLYLQST STLPPRSVDR AAQLLAMASE  180
WEAVDLGMGL VHHHTTNTTT MPPAPSPSSI NHQAWQRSKN KQNLPAAPAA GGGGDDPNSR  240
SEDGGVRRCP HCASEKTQQW RTGPLGPKTL CNACGVRYKS GRLVPEYRPA ATPRSCSRST  300
PTRTARSWSC AARRSSSTSA APHPLLHHRH SETTACADLP CPA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5o7y_A3e-298147171330Thebaine 6-O-demethylase
5o9w_A3e-298147171330Thebaine 6-O-demethylase
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7228422