PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01421.1.g00200.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 418aa    MW: 44383.2 Da    PI: 7.0911
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01421.1.g00200.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.51.8e-1197148555
                                   HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                   h ++Er RR+r+   f+eL   lP+ + k ++   +K++i+++A++YI+sL+
  Zmw_sc01421.1.g00200.1.sm.mk  97 HYMVERERRRRMTGMFAELNAFLPNsNKKVRAYAADKVTIVTEAINYIRSLE 148
                                   889**********************6656666669***************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.20892147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-1296162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-897148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-1297167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.8E-798153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00154105149No hitNo description
PROSITE profilePS516718.696340418IPR002912ACT domain
CDDcd021160.00823341393No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MAQDGHHAGH QGAVDASDGH GTPAPAVTSP RVSSNQGTWR RVRAVAADDV DNRKDVVDLA  60
PVKVERADVR VTDDDVTKGK GKAPADADGA GNEVPPHYMV ERERRRRMTG MFAELNAFLP  120
NSNKKVRAYA ADKVTIVTEA INYIRSLEDT YQKLEKRRRE LALARQASQP DHGAGSSSAP  180
PPYDAGQATG LSPVLSLDLA GSSSVPPPDA GWLSMGLSPV LPLGRAGSSS VPPPGTFLGT  240
GRSSFLPLGR AGSSSVPPPG TFLGTGQSSV LPLGRADSSS VLLPPAFLGT VRSSVLPQGW  300
SWLPKRRKPE AGEVAVPQPI GFQTYSEANV GLNLMGDDAF ITTCVPKRPG VLLLVLTILE  360
KHHIDVISGH ILSDVKRSKF TLYTRVNVEE IHELDPEAPA PEDILQLAVS EIIVWLSG
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2820935