PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01480.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 384aa MW: 41616.4 Da PI: 4.7691

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01480.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	44.8	4e-14	12	147	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.........kvkaeekewyfFskrdkkyat.gkrk 74 f F P+d lv + L++k+ g +++ + + + d+++v P++L k + +++ ++ yfFs+++ +++ +k++ Zmw_sc01480.1.g00020.1.sm.mk 12 FMFTPSDRRLV-DILRAKIGGGDFPNAAYFVDNDVCSVRPEELVsKhskparvrsREAGDGRQFYFFSPESFVSTRtKKQR 91 89*******.88*****999888**********73367777554322225568899999887766413333 PP NAM 75 nratk....sgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +r+++ + W+ g+ k v ++ g + + f+ k ++ k W+m ey+l Zmw_sc01480.1.g00020.1.sm.mk 92 KRTIDgtsgNECWHGEGSGKLVDG---TNDGYMTKFSFHiKIAGETVAKPGWLMTEYSL 147 444223322445*9877754...567888889999444667777*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	20.461	8	163	IPR003441	NAC domain
SuperFamily	SSF101941	5.75E-20	12	163	IPR003441	NAC domain
Pfam	PF02365	3.3E-10	12	147	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence Send to blast
MAAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDNDVCSVRP EELVSKHSKP 60 ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDGTSG NECWHGEGSG KLVDGTNDGY 120 MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS KAPSSLENKR 180 KAGDDLEDAR PSTKERRQDQ IDANGALEGD LPLPSDDLPS VNPAVQTVYG ALTDGEVIDA 240 LASGVTVDEL IPSTTEDRQP EPHVLPASFD ALMHMMHCPL GVWEVLNGMR TEAFEAYRGL 300 FGSTYDVVNA QNNATVQTGP GALTDGGVVA AHASGATIDE LIPSTTDERQ PESQVLLEDD 360 GMPFQVPEVV DTHTHFMGLI FGKN

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence Send to blast

MAAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDNDVCSVRP EELVSKHSKP  60
ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDGTSG NECWHGEGSG KLVDGTNDGY  120
MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS KAPSSLENKR  180
KAGDDLEDAR PSTKERRQDQ IDANGALEGD LPLPSDDLPS VNPAVQTVYG ALTDGEVIDA  240
LASGVTVDEL IPSTTEDRQP EPHVLPASFD ALMHMMHCPL GVWEVLNGMR TEAFEAYRGL  300
FGSTYDVVNA QNNATVQTGP GALTDGGVVA AHASGATIDE LIPSTTDERQ PESQVLLEDD  360
GMPFQVPEVV DTHTHFMGLI FGKN

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45