PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01527.1.g00170.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 948aa MW: 102687 Da PI: 11.9491

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01527.1.g00170.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.6e-19	498	560	1	47
TSSS-HHHHHHHHHHHHHTTTT.................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.................tWktIartmgkgRtlkqcksrwqky 47 +g+WT+eEde+lv ++k++G g +W++Ia++++ gRt++++k++w+++ Zmw_sc01527.1.g00170.1.am.mk 498 KGPWTAEEDEKLVAYIKKHGQGnwrtlpknagkrslssdRWSAIAARLP-GRTDNEIKNYWNTH 560 79*********************************************.**********97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-22	489	569	IPR009057	Homeodomain-like
PROSITE profile	PS51294	19.932	493	565	IPR017930	Myb domain
SuperFamily	SSF46689	5.26E-15	495	557	IPR009057	Homeodomain-like
SMART	SM00717	3.6E-19	497	563	IPR001005	SANT/Myb domain
Pfam	PF00249	2.1E-9	498	532	IPR001005	SANT/Myb domain
CDD	cd00167	5.31E-14	500	561	No hit	No description
Pfam	PF00249	6.9E-7	536	560	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 948 aa Download sequence Send to blast
MTTSPDQEQE IFLREPPGYG EISAGPRGHV RPVVRVRLAV FVTTLASRLA NVGNAKARVG 60 CTRTHCALGL LQVCSASALS AHVALQLTWI PDAGGPGHAS PQKQSYGGSA HGYLALAPFC 120 YTGRDTNAGT IRSTIQPSVS SARRNANIGR RHTCALTITL VARTSGARRS PRTATAAFPR 180 SRNFISLDAD EIRRRPVSVL GLGGGGVSGE RTAGQRRSEK RRRAFRRGQQ AGIDARRNET 240 RAAPVARGQN ATARWPAASL QGTKAEGPPP AGRPNAAKLS AVAARGMHAF ERTRRTACVT 300 NQRATWGRQA LRAISRASCF VPYPGLRSGM PMDDDAALRT VSRFFDCRSE ALDSALRPAR 360 RPLTPLPRTP RRLAIARASC RATFGAWGCS AITVGLLTFY PPRPTPRWIP RAADPRCVSP 420 SAVPPVAPRG HVAGAGHKCR HRILLTSPPR RVRALIKEPP VLHLDLLSSF LASGSDRSGS 480 SSIQMGRAPC CEKTGLKKGP WTAEEDEKLV AYIKKHGQGN WRTLPKNAGK RSLSSDRWSA 540 IAARLPGRTD NEIKNYWNTH IRKRLLRMGI DPVTHAPRLD LLDLSSLLKP AAAAYYSTQA 600 DLDTLRALEP LANYPELLRL ASALLAGTPA VADHQQQQLL PWLLHQAQMT QQAATAAAMA 660 AQQVTAPTTT TQADQFMQQT AVAEVASHDW VARPLSLLLC VTAFRPGAGE PHAPRDGDKT 720 EASSAALIDP CFSWVRASAK SSGQNPAATT AALVMYTASV GDVVASPPSG APRRGRVGCH 780 LRARARPSLS RRPSPNLSPS RPRRLTLRQR RSSSYPPSQL PWSTTNMVNL ISTIDASVQM 840 QRTLPKLSAV FVFYLRVTSP RVDTNEPPTG SSPPGGWRAN IAVPWFPWAG VLPPLRKTAS 900 RRSSQPRYTG VAARVVHSRI ARRIMEYVTR RDRGPTGRRP VDTRERDA

Sequence ? help Back to Top

Protein Sequence Length: 948 aa Download sequence Send to blast

MTTSPDQEQE IFLREPPGYG EISAGPRGHV RPVVRVRLAV FVTTLASRLA NVGNAKARVG  60
CTRTHCALGL LQVCSASALS AHVALQLTWI PDAGGPGHAS PQKQSYGGSA HGYLALAPFC  120
YTGRDTNAGT IRSTIQPSVS SARRNANIGR RHTCALTITL VARTSGARRS PRTATAAFPR  180
SRNFISLDAD EIRRRPVSVL GLGGGGVSGE RTAGQRRSEK RRRAFRRGQQ AGIDARRNET  240
RAAPVARGQN ATARWPAASL QGTKAEGPPP AGRPNAAKLS AVAARGMHAF ERTRRTACVT  300
NQRATWGRQA LRAISRASCF VPYPGLRSGM PMDDDAALRT VSRFFDCRSE ALDSALRPAR  360
RPLTPLPRTP RRLAIARASC RATFGAWGCS AITVGLLTFY PPRPTPRWIP RAADPRCVSP  420
SAVPPVAPRG HVAGAGHKCR HRILLTSPPR RVRALIKEPP VLHLDLLSSF LASGSDRSGS  480
SSIQMGRAPC CEKTGLKKGP WTAEEDEKLV AYIKKHGQGN WRTLPKNAGK RSLSSDRWSA  540
IAARLPGRTD NEIKNYWNTH IRKRLLRMGI DPVTHAPRLD LLDLSSLLKP AAAAYYSTQA  600
DLDTLRALEP LANYPELLRL ASALLAGTPA VADHQQQQLL PWLLHQAQMT QQAATAAAMA  660
AQQVTAPTTT TQADQFMQQT AVAEVASHDW VARPLSLLLC VTAFRPGAGE PHAPRDGDKT  720
EASSAALIDP CFSWVRASAK SSGQNPAATT AALVMYTASV GDVVASPPSG APRRGRVGCH  780
LRARARPSLS RRPSPNLSPS RPRRLTLRQR RSSSYPPSQL PWSTTNMVNL ISTIDASVQM  840
QRTLPKLSAV FVFYLRVTSP RVDTNEPPTG SSPPGGWRAN IAVPWFPWAG VLPPLRKTAS  900
RRSSQPRYTG VAARVVHSRI ARRIMEYVTR RDRGPTGRRP VDTRERDA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP72487	2	2