PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01557.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 167aa    MW: 18298.7 Da    PI: 10.4231
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01557.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.11.7e-1277124552
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                                   ++ rr+++NRe+A+rsR RK+ ++ eL  +v+eL + N++L  el++ 
  Zmw_sc01557.1.g00110.1.am.mk  77 RKRRRLASNRESAKRSRVRKQRRLGELSARVAELRGANQRLLVELNRV 124
                                   678999************************************999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.1E-1273137IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.62275138IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.0E-975124No hitNo description
PfamPF001709.9E-1077124IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-877125No hitNo description
CDDcd147022.48E-1278124No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MQRDCVGVVA LACPPSFVDF ASSFLLQDDP PPDLYGFSSP DTVGPGRPYT CVGGGVVVPV  60
SAMGAADGRA RRGTDERKRR RLASNRESAK RSRVRKQRRL GELSARVAEL RGANQRLLVE  120
LNRVGAKHAR VVRENAELRE EADGLRKRLR EMEVDGDEGA TRAPEMA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17680RKRRR
27781KRRRL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014660928.18e-45basic leucine zipper 8
TrEMBLK3YXV12e-43K3YXV1_SETIT; Uncharacterized protein
STRINGSi019099m3e-44(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735