PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01560.1.g00220.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 153aa MW: 18276.2 Da PI: 10.3589

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01560.1.g00220.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.3e-53	8	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 + pGfrFhPtde lv yL++k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t++g Zmw_sc01560.1.g00220.1.am.mk 8 MLPGFRFHPTDEKLVRLYLERKIQQKSLPI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTRAG 87 579*************************.89***********9888999********************** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wkatg+d++++s+ +++ +glkk+Lvfykgra kg+ktdW+mhe+rl Zmw_sc01560.1.g00220.1.am.mk 88 FWKATGTDRPIYSSdRSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 135 *********967778*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.75E-54	6	140	IPR003441	NAC domain
PROSITE profile	PS51005	51.357	8	153	IPR003441	NAC domain
Pfam	PF02365	1.4E-25	10	135	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence Send to blast
MEKQEEVMLP GFRFHPTDEK LVRLYLERKI QQKSLPIELI RQLDIYKYDP WDLPKLASTG 60 EKEWYFYCPR DRKYRNSTRP NRVTRAGFWK ATGTDRPIYS SDRSKCIGLK KSLVFYKGRA 120 AKGVKTDWMM HEFRLPSLTD PSLQQKKPLE KTI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-52	10	135	17	140	Stress-induced transcription factor NAC1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002454285.1	1e-104	putative NAC domain-containing protein 94
Refseq	XP_020171862.1	1e-104	putative NAC domain-containing protein 94
Swissprot	Q9FIW5	4e-85	NAC94_ARATH; Putative NAC domain-containing protein 94
TrEMBL	A0A287UQU3	1e-103	A0A287UQU3_HORVV; Uncharacterized protein
STRING	Sb04g028015.1	1e-103	(Sorghum bicolor)
STRING	Traes_6BL_A169A3ECB.1	1e-103	(Triticum aestivum)
STRING	Traes_6DL_DA233B945.1	1e-103	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13717	26	29