PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01573.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 256aa MW: 28392.2 Da PI: 10.0403

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01573.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	39.3	1.8e-12	32	117	6	97
DUF573 6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 ws++D i +L +l +++g ++ + v++s++ + s s+l eK+rrLK++++k v+k + s++ Zmw_sc01573.1.g00060.1.es.mkhc 32 AWSNKDSIKILEALAAHVQSEGR--LPKTNFLLAAVRDSLDrKDCSYSDLYEKVRRLKERYEKTVSK-----GILPSEK 103 6**************999995..567899*****83579******************.....5556677 PP DUF573 84 hdqkifelskkiWg 97 ++ ++++lsk iWg Zmw_sc01573.1.g00060.1.es.mkhc 104 DELQMYHLSKAIWG 117 7889*******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.8E-17	32	117	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence Send to blast
KAKKPGGKPE KSGLDSTQPL SKSENSARAP CAWSNKDSIK ILEALAAHVQ SEGRLPKTNF 60 LLAAVRDSLD RKDCSYSDLY EKVRRLKERY EKTVSKGILP SEKDELQMYH LSKAIWGDKA 120 KGAIAASATQ NVSTATKSNK GQDNKEKMDG SSRGGTSKDA THKEKAEIGA RMLQGMRRSS 180 DELQNLYPSL AWSVETMVLQ HSCGETLKRG FEFIDDQKAN AFESKIEKQR ISEVKVQLRR 240 ADISKEVLKM LNASAD

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7289	27	37