PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01574.1.g00150.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 222aa    MW: 24697 Da    PI: 5.5597
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01574.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM72.21.4e-224310570129
                           NAM  70 tgkrknratksgyWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrle 129
                                   +g r nrat++++Wkatgkdke+++++  l   vg+kk+Lvfy+grapkgekt W+mheyrle
  Zmw_sc01574.1.g00150.1.sm.mk  43 NGGRINRATNTSFWKATGKDKEIYQASAMLptiVGMKKILVFYTGRAPKGEKTGWIMHEYRLE 105
                                   789**********************74433666****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.4941127IPR003441NAC domain
SuperFamilySSF1019418.24E-3019124IPR003441NAC domain
PfamPF023651.2E-1422104IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MADHQEQEGI RGGVDDCCMN LPHGFWFHPY DEEIITFYLM PKNGGRINRA TNTSFWKATG  60
KDKEIYQASA MLPTIVGMKK ILVFYTGRAP KGEKTGWIMH EYRLEGSGKL YFPTSSSNST  120
ISKVVPDPHA FHVFKSSRNK EVHVPQSEEA RANNDIDQST MSFSTSIQFS TGPEDDFLVE  180
LGVLCPNMDP TMPFYSTTDA STSVAPMMPP MTSMGTMGID GI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-161910413140Stress-induced transcription factor NAC1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025801540.18e-46NAC domain-containing protein 79-like
TrEMBLA0A1E5V4C42e-49A0A1E5V4C4_9POAL; NAC domain-containing protein 79
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2792435