PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01599.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 780aa MW: 85248.6 Da PI: 4.7052

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01599.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37.4	5.1e-12	670	718	3	50
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGI.kRWPhRkik 50 +++++ d F+l+ k+AAk+L+++++ LKr C ++G +RWP R+i+ Zmw_sc01599.1.g00110.1.am.mk 670 ANMTMADATCLFHLSRKEAAKHLKISPSSLKRLCNRNGAgHRWPARRIN 718 68899999999*********************9999868****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.401	654	740	IPR003035	RWP-RK domain
Pfam	PF02042	1.3E-12	671	718	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 780 aa Download sequence Send to blast
MPTGVRFRSQ SIRFRAETLA SAPRPAGTRK LPHPEQAPLR AVLTRPLAAA VSNPFHTPAA 60 RRLAIPVAAL RFSPCPNIPV PAPLAVATMS DEVYEAEYDV RRYQCQHIPL PDPPHQVLAG 120 SDEAPVGEPQ HMPPVDHALQ APPTLNPGPA PVPATTGFEE PAVDVIERYQ TPAINAEYCQ 180 APPVDAGHYQ APPTDDFEHY LHTLPAMDIE HHHHAPPTID SEHCHYQQAP AMDIEQPQML 240 APEQAFGFPE PPLQVAAGVD FDALPSENYQ APLTADVEHY QEPPTIGFEH HQRGPAMDIE 300 PPQMLAPEQV FGFPESPLME PAGVDFDDLP SGNYQAPPTA DVEHYRAPPT IDVEHYQQAP 360 AMDIEPLQMV PPEQSFVFPE SPLLAADEFD FDTLPSFDEG MLHEAPAGTG SPLLYDQSLV 420 NDEQDEVATF TEGIEASNDT GAAAVAEVEP DVRPPIDEDN LIFVPFVPGQ LDCTDCCTVR 480 ELLHESANHK LFLIVHGADH GPVFHHAIID RTYIGADGET KTNELTYLDL RQCTHHWVQC 540 FIASWLQVLR DDTSGQLKDS WSAFSAAAAG TNNIGTTFPV NNAAHMELEI DMLKKILSEP 600 SANDKEAAAP LAPEASHQAI TPQGVEISQN NQNDWHGLDV PILDSSNLDA EDGSPGEHAS 660 LLAVQRKRIA NMTMADATCL FHLSRKEAAK HLKISPSSLK RLCNRNGAGH RWPARRINGI 720 NTKIKKLEEA AARNGGRIGM MAIREKLGKL KLERAQLYAS TMKSIRENEM NKGAGSSGSK

Sequence ? help Back to Top

Protein Sequence Length: 780 aa Download sequence Send to blast

MPTGVRFRSQ SIRFRAETLA SAPRPAGTRK LPHPEQAPLR AVLTRPLAAA VSNPFHTPAA  60
RRLAIPVAAL RFSPCPNIPV PAPLAVATMS DEVYEAEYDV RRYQCQHIPL PDPPHQVLAG  120
SDEAPVGEPQ HMPPVDHALQ APPTLNPGPA PVPATTGFEE PAVDVIERYQ TPAINAEYCQ  180
APPVDAGHYQ APPTDDFEHY LHTLPAMDIE HHHHAPPTID SEHCHYQQAP AMDIEQPQML  240
APEQAFGFPE PPLQVAAGVD FDALPSENYQ APLTADVEHY QEPPTIGFEH HQRGPAMDIE  300
PPQMLAPEQV FGFPESPLME PAGVDFDDLP SGNYQAPPTA DVEHYRAPPT IDVEHYQQAP  360
AMDIEPLQMV PPEQSFVFPE SPLLAADEFD FDTLPSFDEG MLHEAPAGTG SPLLYDQSLV  420
NDEQDEVATF TEGIEASNDT GAAAVAEVEP DVRPPIDEDN LIFVPFVPGQ LDCTDCCTVR  480
ELLHESANHK LFLIVHGADH GPVFHHAIID RTYIGADGET KTNELTYLDL RQCTHHWVQC  540
FIASWLQVLR DDTSGQLKDS WSAFSAAAAG TNNIGTTFPV NNAAHMELEI DMLKKILSEP  600
SANDKEAAAP LAPEASHQAI TPQGVEISQN NQNDWHGLDV PILDSSNLDA EDGSPGEHAS  660
LLAVQRKRIA NMTMADATCL FHLSRKEAAK HLKISPSSLK RLCNRNGAGH RWPARRINGI  720
NTKIKKLEEA AARNGGRIGM MAIREKLGKL KLERAQLYAS TMKSIRENEM NKGAGSSGSK

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14429	10	12