PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01641.1.g00200.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 132aa MW: 14114.4 Da PI: 4.5643

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01641.1.g00200.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	69.9	5.1e-22	68	132	2	63
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKk 63 lfqrlw++eDeiv+L+++ +f+a++g+ +++ d++ fye ++++++ ++ksqlveK+rrLK+ Zmw_sc01641.1.g00200.1.am.mk 68 LFQRLWTDEDEIVILRAFAEFTAQRGTafASHQyDTTPFYEDMRGRLQTGFTKSQLVEKLRRLKR 132 79***********************9977778****************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.4E-17	69	132	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence Send to blast
MVDDPSAAGA GVMISSSFPD ADAYGNGDSE DIDFAGDPNS HASFSAAPAT APASAGAGGS 60 GSGERRALFQ RLWTDEDEIV ILRAFAEFTA QRGTAFASHQ YDTTPFYEDM RGRLQTGFTK 120 SQLVEKLRRL KR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001142743.1	2e-57	uncharacterized protein LOC100275086
Swissprot	Q9CAV7	8e-20	STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBL	A0A1E5VM57	8e-57	A0A1E5VM57_9POAL; Uncharacterized protein
STRING	Pavir.Ib01769.1.p	8e-60	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP974	37	123