PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01649.1.g00150.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 190aa MW: 19295.4 Da PI: 8.965

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01649.1.g00150.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.7	3.9e-11	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 ++lm+v+gLt+e+v+SHLQkYRl Zmw_sc01649.1.g00150.1.sm.mk 1 MQLMSVDGLTRENVASHLQKYRL 23 79********************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.3E-11	1	28	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.6E-8	2	23	IPR006447	Myb domain, plants
SuperFamily	SSF46689	3.4E-5	2	27	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence Send to blast
MQLMSVDGLT RENVASHLQK YRLYLKRMQG VGGAGGGGGG GAGGGHSSGS GTDAATEHLF 60 ATGPVPFLPP GHGHRAPAGA DPYPPFAPMG AAHHHHHHHH PPQIGHFHHP ARPLGHYGAA 120 GSGFDHGFLS RSVAPPVGPP GMHHRMVGGA AGMGMIAPGS YGDDLDLGSR GGGSNGGRRE 180 LTLFPTSGDH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001310197.1	9e-65	uncharacterized protein LOC107548110
TrEMBL	A0A1E5WG62	1e-69	A0A1E5WG62_9POAL; Transcription factor LUX
STRING	GRMZM2G471600_P01	3e-64	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1620	34	105