PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01660.1.g00050.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 176aa    MW: 19019.6 Da    PI: 5.2624
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01660.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY261.8e-082783358
                                  -SS-.EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE.....EEEEEES--SS CS
                          WRKY  3 Dgyn.WrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv.....veitYegeHnh 58
                                  Dgy+ WrKYG  +++g+ +p      + +gCp+k+ v+r+++  ++      +++Y   H++
  Zmw_sc01660.1.g00050.1.am.mk 27 DGYQyWRKYGENQIEGAMYPS-----AEQGCPAKRTVQRNDDGDDIggspkYTVVYMAVHTC 83
                                  88876************9996.....589***********9654432222267888888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.0E-101884IPR003657WRKY domain
PROSITE profilePS508118.6392161IPR003657WRKY domain
SMARTSM007748.1E-82585IPR003657WRKY domain
SuperFamilySSF1182901.28E-92584IPR003657WRKY domain
PfamPF031062.6E-112783IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MNAFDEARRK TKHGISACLV TSVPDFDGYQ YWRKYGENQI EGAMYPSAEQ GCPAKRTVQR  60
NDDGDDIGGS PKYTVVYMAV HTCTANDSME KPVILETTAV QAAYKKPCGA KNIATPAAFL  120
PPPAVESAAA AESSIPILHA VLKIEPDVSL ASGEMKYEQF IGCKGCLLFN FEVFGA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977390.17e-38probable WRKY transcription factor 58
TrEMBLA0A0A9HC424e-39A0A0A9HC42_ARUDO; Uncharacterized protein
STRINGSi010813m3e-37(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058