PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01661.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 742aa MW: 79919.3 Da PI: 10.4285

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01661.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.7	3.1e-06	284	312	4	35
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TT CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskaps 35 +h+ +Er RR+ri +++ L++l+P + ++ Zmw_sc01661.1.g00030.1.am.mk 284 SHSLAERVRRERISQRMKVLQDLVPGC---NK 312 8************************98...44 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.75E-7	278	313	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.43E-5	278	314	No hit	No description
PROSITE profile	PS50888	10.08	280	353	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.3E-7	283	313	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence Send to blast
MSDRVNLSLL PSRRKQGIAS PVHHHFDLQL IIHSPKHPST PPPSPKAAPS YKTSSSASDS 60 PPKEGSIPEI HHQARGRFSD GALVNSFPSR PASGDYIASL LSSSPRLDFG VLGGVSVLDG 120 AAGRDGGDSL EKFCGDPGFA ERAARLSSFS GERFAGAAGL FGLPPPALAA SNGCSRETSS 180 VSDPASAMRD ANAKKRKAPA PLKGKGKESS SQTGEQNDSD AKRCKTDGVE KESSPVKPKA 240 EQAGSDISVE DNGQKPGKGK NAKPVEPPKD YVHVRARRGQ ATDSHSLAER VRRERISQRM 300 KVLQDLVPGC NKQRNFWEED LPGVFHIENG QSQENGVSAQ SFHESLVYYL AYVRLYTKYC 360 LMVLRLVVAA YSAVAFLSSR PTKDRPGSLL AGSHCSSCNP NLLLLHTDDP KVLDIPTQLV 420 YNSTTQHKAL VWNGANVAAS GRVFVAFLRF MCSFNRDPAE KPPYFTANFA VRFGVALAAR 480 FLLPGKRRGT ELFVHSSLSF GAGAGNAKGF PVVVFHLDSL KVKRRYYEAP NFRHASKTAG 540 RRRAAFNAMP GHFPPPSLYV SASTLCCMET RGNAGCGSGV VLDRVPPVRR STLKYGFSRP 600 ASAIGVNRRR GARTAARAVQ HALHMSISLP SFVFGSRTCR ASASATTLMS HENGADRINI 660 GHEARRVRCH DGRPTRSRSG QRSCLDGHGV VEISPSKIPS PRAGVPLLRR RRGCGPATIT 720 ATDREVDGGD ESWSVYTAPI DE

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence Send to blast

MSDRVNLSLL PSRRKQGIAS PVHHHFDLQL IIHSPKHPST PPPSPKAAPS YKTSSSASDS  60
PPKEGSIPEI HHQARGRFSD GALVNSFPSR PASGDYIASL LSSSPRLDFG VLGGVSVLDG  120
AAGRDGGDSL EKFCGDPGFA ERAARLSSFS GERFAGAAGL FGLPPPALAA SNGCSRETSS  180
VSDPASAMRD ANAKKRKAPA PLKGKGKESS SQTGEQNDSD AKRCKTDGVE KESSPVKPKA  240
EQAGSDISVE DNGQKPGKGK NAKPVEPPKD YVHVRARRGQ ATDSHSLAER VRRERISQRM  300
KVLQDLVPGC NKQRNFWEED LPGVFHIENG QSQENGVSAQ SFHESLVYYL AYVRLYTKYC  360
LMVLRLVVAA YSAVAFLSSR PTKDRPGSLL AGSHCSSCNP NLLLLHTDDP KVLDIPTQLV  420
YNSTTQHKAL VWNGANVAAS GRVFVAFLRF MCSFNRDPAE KPPYFTANFA VRFGVALAAR  480
FLLPGKRRGT ELFVHSSLSF GAGAGNAKGF PVVVFHLDSL KVKRRYYEAP NFRHASKTAG  540
RRRAAFNAMP GHFPPPSLYV SASTLCCMET RGNAGCGSGV VLDRVPPVRR STLKYGFSRP  600
ASAIGVNRRR GARTAARAVQ HALHMSISLP SFVFGSRTCR ASASATTLMS HENGADRINI  660
GHEARRVRCH DGRPTRSRSG QRSCLDGHGV VEISPSKIPS PRAGVPLLRR RRGCGPATIT  720
ATDREVDGGD ESWSVYTAPI DE

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP35456	3	4