PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01688.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 299aa    MW: 32757.5 Da    PI: 4.4949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01688.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.7e-1676122151
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 
                                   s+y+GVr+++  g+W+Ae+rdp+    +  r++lg+f tae Aa+a++ a++
  Zmw_sc01688.1.g00040.1.sm.mk  76 SQYHGVRRRP-LGKWAAEVRDPV----KgVRVWLGTFPTAEAAARAYDDAAR 122
                                   78********.8*********75....44********************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.62E-1376109No hitNo description
SuperFamilySSF541719.15E-1776134IPR016177DNA-binding domain
PfamPF008473.6E-1077121IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-2477134IPR001471AP2/ERF domain
PROSITE profilePS5103220.27177134IPR001471AP2/ERF domain
SMARTSM003801.7E-2277140IPR001471AP2/ERF domain
PRINTSPR003671.4E-87889IPR001471AP2/ERF domain
PRINTSPR003671.4E-8100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MCGGAILAEL IPSEPERRVT PGTLCPGKSS HDDDFEAAFR EFNDEDEDDE RPFGFGAGGA  60
SAVGSKRERR RRRTPSQYHG VRRRPLGKWA AEVRDPVKGV RVWLGTFPTA EAAARAYDDA  120
ARXXXXXXXX XXFPASSVAA KVRAGKRRAA ADTAAAYVAH LGDERDIPLT AQNERQPHLG  180
DERDIPLTAQ NDASGCSGAL PDFSWQGMSA SDNGATRPVD LDDIELCSGP KRLRSEAEET  240
EASPAATEDL LFDPFVFGEQ LSFFHGGAYE QPEEQRGESM GLWGFDDDRL VDETPVCYY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-12771341472Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16873RRRRRT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797880.11e-58ethylene-responsive transcription factor ERF073-like
TrEMBLA0A2T8I6493e-57A0A2T8I649_9POAL; Uncharacterized protein
STRINGPavir.Ia04158.1.p2e-55(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43712654