PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01706.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 136aa MW: 15598.6 Da PI: 5.9826

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01706.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	48.1	3.8e-15	12	136	2	125
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratks 80 ppG+ F+Ptd+el+++yL ++ gk +l+++ +++ ++ +++P++L +++ +++ ++f+++ ++ r+ + Zmw_sc01706.1.g00050.1.sm.mk 12 PPGLIFDPTDKELIWHYLLPQSLGKLETLSSFvVEDNKVANTQPRKLFQNHGLSDNlPTFFYVRDERPD--ACRNCLCDGD 90 8******************9999977766648888*******7555555553667777777654..568888899 PP NAM 81 gyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmhe 125 g Wk + d +vl ++++ ++++ L f + + +Wvmhe Zmw_sc01706.1.g00050.1.sm.mk 91 GLWKIQKCeskdDPHVLIVgGTNVRWTRNNLNFNLD---S-GSFSWVMHE 136 **5543111133444445777899***832...3.3679**8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-18	7	136	IPR003441	NAC domain
PROSITE profile	PS51005	18.03	11	136	IPR003441	NAC domain
Pfam	PF02365	9.8E-12	12	136	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence Send to blast
MSAAKFFSDN HPPGLIFDPT DKELIWHYLL PQSLGKLETL SSFVVEDNKV ANTQPRKLFQ 60 NHGLSDNLPT FFYVRDERPD ACRNCLCDGD GLWKIQKCES KDDPHVLIVG GTNVRWTRNN 120 LNFNLDSGSF SWVMHE

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8717	9	46