PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01726.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

TCP

Protein Properties

Length: 112aa MW: 11814.6 Da PI: 12.2682

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01726.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	71.9	1.9e-22	1	51	24	74
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasece 74 +++ c a +F+L++eLG+++d++tieWLl+qa+p+i+ +tgt++++as ++ Zmw_sc01726.1.g00060.1.sm.mk 1 MPIICTAPVFQLTRELGHKSDGQTIEWLLRQAEPSIIVATGTGTTPASVST 51 9*****************************************999995551 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	7.4E-17	1	56	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	18.159	1	39	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 112 aa Download sequence Send to blast
MPIICTAPVF QLTRELGHKS DGQTIEWLLR QAEPSIIVAT GTGTTPASVS TSSFSPTAVD 60 GMPIIAAPMT TPKLHPSLRR ASGRFRRGMT PLASSAASGP RLTSPSRTRR GT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018436782.1	2e-26	PREDICTED: transcription factor TCP7-like
TrEMBL	A0A2U1L6V6	7e-25	A0A2U1L6V6_ARTAN; Transcription factor, TCP

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1941	33	100