PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01739.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 1075aa MW: 115052 Da PI: 9.5984

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01739.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.9	2.8e-16	742	788	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq Zmw_sc01739.1.g00030.1.am.mk 742 VHNRSERRRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 788 6***********************8.....6****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.01E-20	736	803	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	18.279	738	787	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.4E-13	742	788	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.6E-20	742	796	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.2E-18	744	793	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.44E-8	752	792	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 1075 aa Download sequence Send to blast
MALNKPRISH QVGRERPLRH GLREGGDRGL LLLRERPPAT HRSSAGTRKR EVAATDLLPS 60 RRKVVPLGDR PRLGQRGRRP RRRRRHGRML YGRLTSGGGK LPEQRVRCTT LRAIGLGAER 120 TETWLAEDER TPLVLPRRRG AVPIADGRMD HAGLGSRQNH ELNLAARSGL PKPRSDSSWP 180 RSAVHQTPAK VAREDATASR AMAGRPGSPT MASWCLGPMV GPLTLASVPP YSGSCDPRAA 240 NKRDPERRLV ALPGLACRLP VWGKGCATAT CAARPSAFPQ GDRRIEGKDA CSDLLMQMFM 300 ETGEKPPAPG RASGHEEGTG IGIHRHFHGD ISHVRDPRPI LYHLVDARRL PEMQVNPTDA 360 RAAPRRVETA KRARPTSSGS FDSANRPVPC CSTALLKSNR EALLFPASPP LLLLLQSEDK 420 QDRFSSCPRT RSSCLEFTGA NASRAGILLR REDDDLIELL WCNGHVVMQS QTNRKLPPPR 480 PEKPGPLGSP PPPPPAAAVT PTAAQEDEAG LWFSFALADV LDKDIFSDFF SEAPPVAAPA 540 TAVEAGKPPC RDVPVPVPPR EDGGTHGAVS DAPRHLMPPP KSTPHVSCSR QQTTNLGDDL 600 SELVPAGSGR KAAGTEAGAS SSTLSAIGSS ICRSNQVLVP LRAPATAACG GSTLPSAVGS 660 ANANASGRGH ETTVASSSGR SSGCFGATTE PTSTSNRSSK RKRLDTEDSE SPSEDAESES 720 TAAERKPPPK LPTARRSRAA EVHNRSERRR RDRINEKMRA LQELIPHCNK TDKASMLDEA 780 IEYLKSLQLQ VQMMWMGSGV TAPPVMFPGV HQYLPRMGVG MGAAAAAAMP RMPFMAPQLV 840 NPVPLSPGYL GHMPAVGITE PYAHYLGTVN HLQPTLTQHF AQGVDYYPLG TKAVQQNPAL 900 HVPGAGGSMT AAAPGVLPPE SAPNKGPGTT PSYIYSPHQN RRPNYEGQPI IPRPPPESMD 960 DLTLLSPEDM VAVMLGPGLS PISHNALPTI ADSSTATTAS CACRRAEEEA ISSSFLLLCN 1020 VMCCDGWCID WVARGGQSAN VAATSMDELV RAVAIHACML LLEQGRVGVV SSERL

Sequence ? help Back to Top

Protein Sequence Length: 1075 aa Download sequence Send to blast

MALNKPRISH QVGRERPLRH GLREGGDRGL LLLRERPPAT HRSSAGTRKR EVAATDLLPS  60
RRKVVPLGDR PRLGQRGRRP RRRRRHGRML YGRLTSGGGK LPEQRVRCTT LRAIGLGAER  120
TETWLAEDER TPLVLPRRRG AVPIADGRMD HAGLGSRQNH ELNLAARSGL PKPRSDSSWP  180
RSAVHQTPAK VAREDATASR AMAGRPGSPT MASWCLGPMV GPLTLASVPP YSGSCDPRAA  240
NKRDPERRLV ALPGLACRLP VWGKGCATAT CAARPSAFPQ GDRRIEGKDA CSDLLMQMFM  300
ETGEKPPAPG RASGHEEGTG IGIHRHFHGD ISHVRDPRPI LYHLVDARRL PEMQVNPTDA  360
RAAPRRVETA KRARPTSSGS FDSANRPVPC CSTALLKSNR EALLFPASPP LLLLLQSEDK  420
QDRFSSCPRT RSSCLEFTGA NASRAGILLR REDDDLIELL WCNGHVVMQS QTNRKLPPPR  480
PEKPGPLGSP PPPPPAAAVT PTAAQEDEAG LWFSFALADV LDKDIFSDFF SEAPPVAAPA  540
TAVEAGKPPC RDVPVPVPPR EDGGTHGAVS DAPRHLMPPP KSTPHVSCSR QQTTNLGDDL  600
SELVPAGSGR KAAGTEAGAS SSTLSAIGSS ICRSNQVLVP LRAPATAACG GSTLPSAVGS  660
ANANASGRGH ETTVASSSGR SSGCFGATTE PTSTSNRSSK RKRLDTEDSE SPSEDAESES  720
TAAERKPPPK LPTARRSRAA EVHNRSERRR RDRINEKMRA LQELIPHCNK TDKASMLDEA  780
IEYLKSLQLQ VQMMWMGSGV TAPPVMFPGV HQYLPRMGVG MGAAAAAAMP RMPFMAPQLV  840
NPVPLSPGYL GHMPAVGITE PYAHYLGTVN HLQPTLTQHF AQGVDYYPLG TKAVQQNPAL  900
HVPGAGGSMT AAAPGVLPPE SAPNKGPGTT PSYIYSPHQN RRPNYEGQPI IPRPPPESMD  960
DLTLLSPEDM VAVMLGPGLS PISHNALPTI ADSSTATTAS CACRRAEEEA ISSSFLLLCN  1020
VMCCDGWCID WVARGGQSAN VAATSMDELV RAVAIHACML LLEQGRVGVV SSERL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	82	RRPRRR
2	77	84	RRPRRRRR
3	746	751	ERRRRD

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3107	36	77