PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01749.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 806aa MW: 88263.1 Da PI: 4.9625

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01749.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37.3	5.3e-12	694	742	3	50
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGI.kRWPhRkik 50 +++++ d F+l+ k+AAk+L+++++ LKr C ++G +RWP R+i+ Zmw_sc01749.1.g00020.1.am.mk 694 ANMTMADATCLFHLSRKEAAKHLKISPSSLKRLCNRNGAgHRWPARRIN 742 68899999999*********************9999868****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.492	678	764	IPR003035	RWP-RK domain
Pfam	PF02042	1.3E-12	695	742	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence Send to blast
MARSAAISHH AFLRPQLGVR FRSQSIRFRA ETLASAPRPA GTRKLPHPEQ APLRAVLTRP 60 LAAAVSNPFH TPAARRLAIP VSALRFSPCP NIPVPAPLAV ATMSDEVYET EYDVRRYQCQ 120 HIPLSDPPHQ VLAGSDEAPV GEPQHMPPVD HALQAPPTLN PGPAPVPATT GFEAPAVDVI 180 ERYQTPAINA EYCQAPPIDP EHCQAPPVDA GHYQAPPTDD FEHYLHTLPA MDIEHHHHAP 240 PTIDSEHCHY QQAPAMDIEQ PQMLAPEQAF GFPEPPLQVA AGVDYDALPS ENYQAPLTAD 300 VEHYQEPPTI GFEHHQRGPA MDIEPPQMLA PEQVFGFPES PLMEPAGVDF DDLPSGNYQA 360 PPTADVEHYR APPTIDVEHY QQAPAMDIKP LQMVPPEQSF VFPESPLLAA DEFDFDTLPS 420 FDEGMLHEAP AGTGSPLLYD QSLVNDEQDE VATFTEGIEA SNDTGGAAVA EVEPDVRPPI 480 DEDNLIFVPF VPGQLDCTDC CTVRELLHES ANHKLFLMVH GADHGPVFHH AIIDRTYICA 540 DGETKTNELT YLDLRQRTHH WVQCFIASWL QVLRDDTSGQ LKDSWSAFSA AAAGTNNIGT 600 TFPVNNAAHM ELEIDMLKKI LSEPSANDKE AAAPLAPEAS HQAITPQGVE ISQNNQNDWH 660 GLDVPILDSS NLDAEDGSPS EHASLLAVQR KRIANMTMAD ATCLFHLSRK EAAKHLKISP 720 SSLKRLCNRN GAGHRWPARR INGINTKIKK LEEAAARNGG RIGMMAIREK LGKLKLERAQ 780 LYASTMKSIR ENEMNKGAGS SGSKKL

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence Send to blast

MARSAAISHH AFLRPQLGVR FRSQSIRFRA ETLASAPRPA GTRKLPHPEQ APLRAVLTRP  60
LAAAVSNPFH TPAARRLAIP VSALRFSPCP NIPVPAPLAV ATMSDEVYET EYDVRRYQCQ  120
HIPLSDPPHQ VLAGSDEAPV GEPQHMPPVD HALQAPPTLN PGPAPVPATT GFEAPAVDVI  180
ERYQTPAINA EYCQAPPIDP EHCQAPPVDA GHYQAPPTDD FEHYLHTLPA MDIEHHHHAP  240
PTIDSEHCHY QQAPAMDIEQ PQMLAPEQAF GFPEPPLQVA AGVDYDALPS ENYQAPLTAD  300
VEHYQEPPTI GFEHHQRGPA MDIEPPQMLA PEQVFGFPES PLMEPAGVDF DDLPSGNYQA  360
PPTADVEHYR APPTIDVEHY QQAPAMDIKP LQMVPPEQSF VFPESPLLAA DEFDFDTLPS  420
FDEGMLHEAP AGTGSPLLYD QSLVNDEQDE VATFTEGIEA SNDTGGAAVA EVEPDVRPPI  480
DEDNLIFVPF VPGQLDCTDC CTVRELLHES ANHKLFLMVH GADHGPVFHH AIIDRTYICA  540
DGETKTNELT YLDLRQRTHH WVQCFIASWL QVLRDDTSGQ LKDSWSAFSA AAAGTNNIGT  600
TFPVNNAAHM ELEIDMLKKI LSEPSANDKE AAAPLAPEAS HQAITPQGVE ISQNNQNDWH  660
GLDVPILDSS NLDAEDGSPS EHASLLAVQR KRIANMTMAD ATCLFHLSRK EAAKHLKISP  720
SSLKRLCNRN GAGHRWPARR INGINTKIKK LEEAAARNGG RIGMMAIREK LGKLKLERAQ  780
LYASTMKSIR ENEMNKGAGS SGSKKL

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14429	10	12