PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01783.1.g00100.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WOX
Protein Properties Length: 1038aa    MW: 111838 Da    PI: 10.1146
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01783.1.g00100.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.25.2e-17891950357
                                   --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                      Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                   +R+++ +eq+++Le l++   r+p+  ++e ++++l    +++ ++V++WFqN++a+e++
  Zmw_sc01783.1.g00100.1.am.mk 891 TRWNPCPEQIKVLEMLYRGgMRTPNSFQIECITEELgkygRIQGKNVFYWFQNHKARERQ 950
                                   8*****************99**************************************97 PP
2Wus_type_Homeobox108.54e-35890952365
             Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                                   +tRW+P peQik+Le+ly+ G+rtPn+ +i+ it+eL +yG+i++kNVfyWFQN+kaRerqkq
  Zmw_sc01783.1.g00100.1.am.mk 890 TTRWNPCPEQIKVLEMLYRGGMRTPNSFQIECITEELGKYGRIQGKNVFYWFQNHKARERQKQ 952
                                   79***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF520581.28E-27105275IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.109.6E-34105254IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM002200.0012434583IPR000719Protein kinase domain
PROSITE profilePS500119.588434789IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.207.7E-14437513No hitNo description
PfamPF000691.4E-7437523IPR000719Protein kinase domain
SuperFamilySSF561124.19E-19438577IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.101.8E-4517564No hitNo description
SMARTSM003897.8E-4888955IPR001356Homeobox domain
CDDcd000860.0042891952No hitNo description
SuperFamilySSF466893.99E-10891956IPR009057Homeodomain-like
PfamPF000461.1E-14891950IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.4E-5892950IPR009057Homeodomain-like
PROSITE profilePS500718.973898951IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1038 aa     Download sequence    Send to blast
MPHRRRLPVF LLLLLHLLSA ASAAGVAPAG AASRPQPTLR TPAPSVAPAK RQPTPAXXXR  60
PLHPRPTPVQ AVAPASSAPT AAAVIASFLA KADPSSHLRV PPAASLCSQP GISCSAAGQV  120
TRLVLESAGL NGTFAPATLS RLAELRVLSL KSNALHGPVP DLSDLVNLKA IYLAGNRFSG  180
PFPVSLASLG RLRSIDLSGN RLSGALPVGI EAVFPHLTFL RLDANHFNGS LPPWNQSELK  240
VLNVSYNDFS GPVPVTPVMT QMGAAAFAGN PKLCGEVVRR ECHLPFFHGD GSNSSAAPPV  300
QSAAASDGGP QREGLSTPDS SAPRSKRAKR RTTVAIAVSV GGVLALLLCA MIAMKRSNKR  360
RRPRSVAYPS PKKSAAASDV SRDNADIGYV ECVRDEETAA IMVPEEKARR LERSGCLTFC  420
AGEAASYSLE QLMRASAEVL GRGSVGTTYK AVLDGRLVVI VKRLDAAKIG PAALEAETFE  480
QNMDSVGRLR HPNLVPLRAF FQAKEERLLV YDYQPNGSLY SLVHDIYAFG VLLIELLSGK  540
PPLQHSVLVA TNLPTYVQSS PESRPTAWQV LKMIQEVKEA DTTGDIGDND TRRGTSLQSW  600
YRRCSVLRFR SMQRKYAAFR LPDALLLLLL RRGVFPTRPP AVQHGACTPS RSSARRAGRP  660
GASALALAIA FHFSELLASQ FTALYRDWHG LSFANPTTQT HALIPVSGLI SPGKDQLLAH  720
AWEHGEMGST SCKNVGVSPA ASAGASMAVW ATFSRGYLHI PSRPVDRSPP TKACSTPFDC  780
YLDLSHATLR PSISGLYRSI ISGRCLPIYK HARTLDKAAS SSSPPSLITS SSSAIPALSL  840
HQCLRPLAPK ISFPESRKKM VVLPEFTRVR NSARLLNCTE LQVQVPMAGT TRWNPCPEQI  900
KVLEMLYRGG MRTPNSFQIE CITEELGKYG RIQGKNVFYW FQNHKARERQ KQKRAALLTL  960
STTSSSLPAE TKDGEEKKEV SEEDAASVSC KRRCKSWGDV HGVGDAATAE VADDHCTNDD  1020
VTLELFPLRP QGKASYSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wls_A1e-1911128234207Pollen receptor-like kinase 3
5wls_B1e-1911128234207Pollen receptor-like kinase 3
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977047.10.0probable inactive receptor kinase At5g67200
TrEMBLA0A368S0090.0A0A368S009_SETIT; Uncharacterized protein
TrEMBLK3YCU20.0K3YCU2_SETIT; Uncharacterized protein
STRINGSi012042m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP538434