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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zmw_sc01866.1.g00060.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | NAC | ||||||||
| Protein Properties | Length: 177aa MW: 19366.2 Da PI: 4.5447 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 50.9 | 5.2e-16 | 4 | 54 | 1 | 50 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkk 50
lppGfrF Pt+eelv++yL+ k++g++ ++e+vi+ +d++ ++Pw+Lp +
Zmw_sc01866.1.g00060.1.sm.mk 4 LPPGFRFYPTEEELVCFYLRSKLDGRRrDDIERVIPVADVCALDPWQLPGT 54
79***********************996667778**************942 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF101941 | 4.45E-17 | 2 | 55 | IPR003441 | NAC domain |
| PROSITE profile | PS51005 | 12.791 | 4 | 154 | IPR003441 | NAC domain |
| Pfam | PF02365 | 1.3E-7 | 5 | 74 | IPR003441 | NAC domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 177 aa Download sequence Send to blast |
MAELPPGFRF YPTEEELVCF YLRSKLDGRR RDDIERVIPV ADVCALDPWQ LPGTSSNISI 60 WMQAMIRSEF SLCRLYTESG HPRQFDSRPR AAAAAAGGGG ENHLIPSSST AALFTSVEET 120 TGRKRKRSPQ NDDTSSSNDG DGGHGHSPQQ LSAQGAGTED GGLVDGTDDW AEFLDWF |
| Annotation -- Protein ? help Back to Top | |||||||
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| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020158910.1 | 9e-25 | LOW QUALITY PROTEIN: NAC domain-containing protein 90-like | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP29144 | 3 | 3 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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