PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01873.1.g00140.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 742aa    MW: 82086.8 Da    PI: 7.189
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01873.1.g00140.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2744.6e-842306574370
                          GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalkl 83 
                                   +L ecA +v++g +  a+++L+r+  la+  + pm Rla  ++ ALa+ l+     + +al +ps+    ++ ++ aa+  
  Zmw_sc01873.1.g00140.1.am.mk 230 ALWECAAHVAAGRFDGASRCLERVLGLAAIGDGPMPRLARILADALARCLLLRLGPVNRALiQPSAYL--DQRSVRAARYG 308
                                   699*********************************************99997888887774555554..33333345556 PP

                          GRAS  84 fsevsPilkfshltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetg 162
                                   f+++ P+l++++++ N+aIl+a+++e+ vH+iD++  + ++ QW+ L++a++ Rp+g+p+l iT+v++    +   l  + 
  Zmw_sc01873.1.g00140.1.am.mk 309 FVKLLPFLRVAYVAINRAILDATDKEKYVHVIDLSgpAANPWQWLKLMRAMSRRPGGAPNLHITVVHD----DGVFLADMW 385
                                   **********************************866799****************************....9******** PP

                          GRAS 163 erLakfAeelgvpfefnvlvakrledleleeL....rvkpgEalaVnlvlqlhrll......................... 214
                                    rL+k Ae+l++ f f+     rle+l++++L    ++++g al  +++lq+h ll                         
  Zmw_sc01873.1.g00140.1.am.mk 386 ARLRKEAESLNMAFTFHG-FLGRLETLDFDKLhdvlDIRSGYALSFSCALQMHGLLavedaaavnvgtstqaswpsgasrf 465
                                   ******************.689999999999866668999***************************************** PP

                          GRAS 215 .................................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                                                                      +  ++   +++ ++v+ +sPkv+vvveqea+hn+++F+ rf ea+ 
  Zmw_sc01873.1.g00140.1.am.mk 466 vrfaggqemnkrdvhpdpspttplcrvaptptpWPPSRVPPLLTRFQHAVRAVSPKVLVVVEQEANHNEPEFAVRFQEAFG 546
                                   *****************************9998334444445668************************************ PP

                          GRAS 263 yysalfdsleaklpres...eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340
                                   yy+alfd+l+  +++e    eer+ vE++llg+ei++v+  eg errerhe l++W +r+ +aGF+pvpls++a ++a+ +
  Zmw_sc01873.1.g00140.1.am.mk 547 YYAALFDALQDRAGPERqmhEERAQVEQVLLGEEIKDVLVREGMERRERHEPLHRWAARMAHAGFGPVPLSYEAKNEADEV 627
                                   *********55555444488************************************************************* PP

                          GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsv 370
                                   lrk + ++y+  e+ ++l+l+ ++rpL++v
  Zmw_sc01873.1.g00140.1.am.mk 628 LRKLALREYENREHGNCLLLCRSERPLYAV 657
                                   *****999********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098541.277201641IPR005202Transcription factor GRAS
PfamPF035141.6E-81230657IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
MDFDSEEDGA PRGYIAGTNF FSEDARSSRV FLITVEPKDW KSYTEFLRSP SVPRLSTSSE  60
PDRPAGRRAH GRGRSSKVDR LAIAAPTTSR VQHSNSLAAA PWRAPRTSTA SERGGHAAPR  120
LLGTNTRGRA NAHIAGVVSS SGGPSVLVNG TPHSGAGIGS SADSSGLHDD EVEQEEDEGF  180
LDDAQHPLLV AGRKKKMTDH PASNARQQPP QEQEDEEGRL AASLVHLPLA LWECAAHVAA  240
GRFDGASRCL ERVLGLAAIG DGPMPRLARI LADALARCLL LRLGPVNRAL IQPSAYLDQR  300
SVRAARYGFV KLLPFLRVAY VAINRAILDA TDKEKYVHVI DLSGPAANPW QWLKLMRAMS  360
RRPGGAPNLH ITVVHDDGVF LADMWARLRK EAESLNMAFT FHGFLGRLET LDFDKLHDVL  420
DIRSGYALSF SCALQMHGLL AVEDAAAVNV GTSTQASWPS GASRFVRFAG GQEMNKRDVH  480
PDPSPTTPLC RVAPTPTPWP PSRVPPLLTR FQHAVRAVSP KVLVVVEQEA NHNEPEFAVR  540
FQEAFGYYAA LFDALQDRAG PERQMHEERA QVEQVLLGEE IKDVLVREGM ERRERHEPLH  600
RWAARMAHAG FGPVPLSYEA KNEADEVLRK LALREYENRE HGNCLLLCRS ERPLYAVYEA  660
KNEADEVLRK LALREYENRE HGNCLLLCRS ERPLYAVSAW RPWTFEVLDS INMAVPLPAG  720
QGPSTWTWPQ QQQQAPFHNL TG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015619131.11e-117scarecrow-like protein 3
TrEMBLA0A1D6QHE21e-132A0A1D6QHE2_MAIZE; Scarecrow-like protein 3
STRINGOS12T0138200-001e-116(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60438176