PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01899.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 766aa MW: 83351.7 Da PI: 10.5906

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01899.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.9	4.9e-05	267	292	4	29
HHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 4 ahnerErrRRdriNsafeeLrellPk 29 +h+ +Er RR+ri +++ L+ l+P Zmw_sc01899.1.g00030.1.am.mk 267 SHSLAERVRRERISERMRVLQALVPG 292 8************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.22E-6	261	293	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.74E-5	261	311	No hit	No description
PROSITE profile	PS50888	9.508	263	318	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.9E-6	266	310	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence Send to blast
MMRCKSASIG SVTESRGSYS YHQAHCTSYR QVAVADKRDV PWHSRPCMPS AVSSSSSSEM 60 SMPEFNGQGT RRRIELRVAN QQSLLASRAV VPPERLENEV AGSSLDVEST YLLMHACGAL 120 KHVAAVDRTH LEFLKPTGPY AYARGFPRLP QQMEHGHTNA SHSLPSYFFY HHGGAGTADS 180 AIPEDASMET SSVVLDTSPQ RTASVDKKRK PGQDGASHCS AHSKNSKEES KKRGGKRERN 240 RKEEMEEEEA PKGYIHVRAR RGQATDSHSL AERVRRERIS ERMRVLQALV PGMLHHHHEA 300 LAMPASILNR APPQSIMVTS TSTSTASYEV HGDGGISFHQ ADGPARSNNL QDGGSYIVQT 360 VGDVPRQELF DQVERSSNER APVANTVAHG VDRKRAFYAR RWRRDGTLSA REKWPRSLLD 420 RSPDAHPTVP PVTAMARTGH IDRRTRQLRP KSIFRSLRSA AQRGAARRHV TCPARWRERR 480 CTKRTRKTDR AAARDGAGAW RSHAAGPGGR MHGMDPGLAG GQAGCSVQSN GQGQGAWQRR 540 CVCGRAGLSR REDSGASQPP GNTKALARLA LLAACHGPAG LTQINWCLWP PYFGFACVGG 600 CYVSPPGSSW RRAVVEIILW DSNPVCPSSV THVKLHAFGE MEADRATVNL SSWSRRAPTG 660 SPERGERHPP ATPCHDDSQV IYDLGRAHSM LGQLLAAAAP WPGSGTLVAV RLAAAPAYAA 720 LACLPRGSAS PSQQRTRRIP ASGHRLPDAL GVVTARLCAG GRSRQA

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence Send to blast

MMRCKSASIG SVTESRGSYS YHQAHCTSYR QVAVADKRDV PWHSRPCMPS AVSSSSSSEM  60
SMPEFNGQGT RRRIELRVAN QQSLLASRAV VPPERLENEV AGSSLDVEST YLLMHACGAL  120
KHVAAVDRTH LEFLKPTGPY AYARGFPRLP QQMEHGHTNA SHSLPSYFFY HHGGAGTADS  180
AIPEDASMET SSVVLDTSPQ RTASVDKKRK PGQDGASHCS AHSKNSKEES KKRGGKRERN  240
RKEEMEEEEA PKGYIHVRAR RGQATDSHSL AERVRRERIS ERMRVLQALV PGMLHHHHEA  300
LAMPASILNR APPQSIMVTS TSTSTASYEV HGDGGISFHQ ADGPARSNNL QDGGSYIVQT  360
VGDVPRQELF DQVERSSNER APVANTVAHG VDRKRAFYAR RWRRDGTLSA REKWPRSLLD  420
RSPDAHPTVP PVTAMARTGH IDRRTRQLRP KSIFRSLRSA AQRGAARRHV TCPARWRERR  480
CTKRTRKTDR AAARDGAGAW RSHAAGPGGR MHGMDPGLAG GQAGCSVQSN GQGQGAWQRR  540
CVCGRAGLSR REDSGASQPP GNTKALARLA LLAACHGPAG LTQINWCLWP PYFGFACVGG  600
CYVSPPGSSW RRAVVEIILW DSNPVCPSSV THVKLHAFGE MEADRATVNL SSWSRRAPTG  660
SPERGERHPP ATPCHDDSQV IYDLGRAHSM LGQLLAAAAP WPGSGTLVAV RLAAAPAYAA  720
LACLPRGSAS PSQQRTRRIP ASGHRLPDAL GVVTARLCAG GRSRQA