PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01994.1.g00120.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 423aa    MW: 46177.4 Da    PI: 7.0261
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01994.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.95.8e-51171451128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lp+GfrFhPtdeel+v+yL ++++  ++++  +i+ev+iy+++PwdLp+k+  +e+ewyfFs+rd+ky++g+r+nra+ +g
  Zmw_sc01994.1.g00120.1.sm.mk  17 LPAGFRFHPTDEELIVHYLMNQAACVPCPV-PIIAEVNIYECNPWDLPRKAVFGENEWYFFSPRDRKYPNGSRPNRAAGNG 96 
                                   799***************************.88***************8777899************************** PP

                           NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatg+dk+v+++  +ge+vg+kk Lvfy gr p+g+ktdW+mheyrl
  Zmw_sc01994.1.g00120.1.sm.mk  97 YWKATGTDKAVVAAasTGETVGVKKALVFYMGRPPRGVKTDWIMHEYRL 145
                                   ************98888999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-619155IPR003441NAC domain
PROSITE profilePS5100555.91217201IPR003441NAC domain
PfamPF023652.2E-2518145IPR003441NAC domain
SuperFamilySSF1019415.1E-61189201IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MANSRSSSSS CRTMPSLPAG FRFHPTDEEL IVHYLMNQAA CVPCPVPIIA EVNIYECNPW  60
DLPRKAVFGE NEWYFFSPRD RKYPNGSRPN RAAGNGYWKA TGTDKAVVAA ASTGETVGVK  120
KALVFYMGRP PRGVKTDWIM HEYRLTVGNG KTTRRAAGSS SSSSSSSSSS MRLLLLARLL  180
HQLRQIDSDL DDWVLCRIHK KSNNFQFSDQ EQEGSSIVEE ADSSLNNTNK DTNGGAPSPA  240
SEQASHASDA GDHQFQLPPH LPKSCSLTDL LNTIDYSALS QLLLDAPAEP EPEPQPQQQG  300
QSPLISYATP ACPQPQLLKS SLNVSQLQVD ALFSDYSAGY YSRSSGLKRK RSSCDDGSSS  360
RRKLQPLPSE ATFFGSASGY CNQQLAEAAS SSGGGFQYSG LLSHPLLNQQ QLLLNSHLEM  420
QMQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-691620614173Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828039.11e-138NAC transcription factor 29-like
TrEMBLA0A2T7CJJ91e-137A0A2T7CJJ9_9POAL; Uncharacterized protein
STRINGSi026530m1e-134(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38033775