PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02015.1.g00250.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 560aa MW: 60195.1 Da PI: 8.8533

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02015.1.g00250.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	33.3	9.9e-11	35	62	2	29
--SS-EEEEEEE--TT-SS-EEEEEE-S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCts 29 D+++WrKYGqK++kgs+fpr r t+ Zmw_sc02015.1.g00250.1.am.mk 35 TDEWAWRKYGQKPIKGSPFPRYAMRGTT 62 69*******************8777765 PP
2	WRKY	44.9	2.3e-14	82	120	22	59
EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ gCp++k+vers+ +p+ v++tY+ eHnh+ Zmw_sc02015.1.g00250.1.am.mk 82 RAYYRCSSSkGCPARKQVERSRANPDKVVVTYSFEHNHS 120 9****998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	24.214	29	122	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	5.3E-26	31	120	IPR003657	WRKY domain
SuperFamily	SSF118290	2.88E-7	32	56	IPR003657	WRKY domain
SMART	SM00774	5.6E-30	34	121	IPR003657	WRKY domain
Pfam	PF03106	4.7E-6	36	59	IPR003657	WRKY domain
SuperFamily	SSF118290	3.53E-11	81	120	IPR003657	WRKY domain
Pfam	PF03106	2.4E-12	81	119	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence Send to blast
AGGRRRSANK RVVTVPLADV SGPRPKGVGE GNTSTDEWAW RKYGQKPIKG SPFPRYAMRG 60 TTSIQRDRRR IGIFADLGFG RRAYYRCSSS KGCPARKQVE RSRANPDKVV VTYSFEHNHS 120 AAVSRAQNRQ APKPMAQAPV PPEPPAEDQS VSAGTHDVVA ACATEGCGAG AAVEVHDEFR 180 WLYDGVSVTS SIPPSDADEM LYYGPMFFGA AAVASAPAPF PDELGDVGAL FGGGAAEEDA 240 MFAGLGELPE CAMVFRRRAE DGLTTAGGVK VEPAAEGAAI TFVFDAMPER VNWGLDVSSR 300 SITVDLPAGG DASRLTRSAN GCARTSTGDF RVPVSHLITW GFDWASGIAT CDWVRFFTQA 360 GVWIERTAAW RVTNGRAWAP GGQFSFGTLA QVRSLHQAHG ACASFASSVP KENRPVIDNQ 420 RGRLSALQYC LSPTPSATRS PPPPLRCCLA SIPTTLHIRG GTGLEEWIRG GICPDGRTIP 480 EELPWRDGDA AIPRRISQPN VLPEWSSVCR VQPLPVVPGP VSVASTKANE LFSPRCRSYL 540 ISQRKRNPIG IIVFPIVREP

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence Send to blast

AGGRRRSANK RVVTVPLADV SGPRPKGVGE GNTSTDEWAW RKYGQKPIKG SPFPRYAMRG  60
TTSIQRDRRR IGIFADLGFG RRAYYRCSSS KGCPARKQVE RSRANPDKVV VTYSFEHNHS  120
AAVSRAQNRQ APKPMAQAPV PPEPPAEDQS VSAGTHDVVA ACATEGCGAG AAVEVHDEFR  180
WLYDGVSVTS SIPPSDADEM LYYGPMFFGA AAVASAPAPF PDELGDVGAL FGGGAAEEDA  240
MFAGLGELPE CAMVFRRRAE DGLTTAGGVK VEPAAEGAAI TFVFDAMPER VNWGLDVSSR  300
SITVDLPAGG DASRLTRSAN GCARTSTGDF RVPVSHLITW GFDWASGIAT CDWVRFFTQA  360
GVWIERTAAW RVTNGRAWAP GGQFSFGTLA QVRSLHQAHG ACASFASSVP KENRPVIDNQ  420
RGRLSALQYC LSPTPSATRS PPPPLRCCLA SIPTTLHIRG GTGLEEWIRG GICPDGRTIP  480
EELPWRDGDA AIPRRISQPN VLPEWSSVCR VQPLPVVPGP VSVASTKANE LFSPRCRSYL  540
ISQRKRNPIG IIVFPIVREP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2T7DH68	5e-94	A0A2T7DH68_9POAL; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP10947	33	41