PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02074.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 293aa    MW: 32462.5 Da    PI: 6.5088
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02074.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.99.2e-15121412127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk...kvka...eekewyfFskrdkkyatgkrkn 75 
                                   ppG+ F+Ptde l+ + + ++  gk+  +  + +++ +  +++Pw+L +          ++   +f+++ ++     +r++
  Zmw_sc02074.1.g00090.1.am.mk  12 PPGLIFDPTDEGLIEHCILPRSLGKPEAFPGIiVEDKKSANTQPWKLFQnhaL--MpliDQLPAFFYVRDERP--DARRSR 88 
                                   8*************************777666366679*********632332..133244466888877775..457999 PP

                           NAM  76 ratksgyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                   r    g Wk + +    d++vl   ++e+ ++++ L f+  +     +  Wvm ey 
  Zmw_sc02074.1.g00090.1.am.mk  89 RCDGGGWWKIQKSeskdDRHVLIIdGREVRWTRNNLNFHLDSG----SVGWVMYEYF 141
                                   9999999*96655222355555445778899********5443....568******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-2110155IPR003441NAC domain
PROSITE profilePS5100518.73211161IPR003441NAC domain
PfamPF023658.0E-1212140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MSPAKFLGDD HPPGLIFDPT DEGLIEHCIL PRSLGKPEAF PGIIVEDKKS ANTQPWKLFQ  60
NHALMPLIDQ LPAFFYVRDE RPDARRSRRC DGGGWWKIQK SESKDDRHVL IIDGREVRWT  120
RNNLNFHLDS GSVGWVMYEY FIDDSPSLKV CRISFSGYSK KRARQLDGHG NGSLAGEPVT  180
QRRRVTDAAG SGPADSTTTS RPMPMPIHNS SAGLDPVNII CDVEFQALLA TADAAMAPFR  240
VSFNHDEEFS AAPDSPSTDN GSMNVLCSLT VVRGSARPSH VELIGQQAHW LPQ
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946