PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02091.1.g00190.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 276aa    MW: 29633.2 Da    PI: 5.4033
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02091.1.g00190.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.21.1e-10256276121
                                     ---SS-EEEEEEE--TT-SS- CS
                            WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                                     ldDgy+WrKYGqK+vkg+++p
  Zmw_sc02091.1.g00190.1.am.mkhc 256 LDDGYRWRKYGQKVVKGNPNP 276
                                     59*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-13241276IPR003657WRKY domain
SuperFamilySSF1182909.29E-9248276IPR003657WRKY domain
PROSITE profilePS5081115.571251276IPR003657WRKY domain
PfamPF031062.9E-6257276IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MAGTSDHVFL MEEWMLPPTP SPRTLMSSFL NEEISPGPFS NLFSDPGDKQ PLDRSEKSRV  60
PLNLSAEMSA QAAKATFQKE FPLHPNVFNA FEKSNSHGGL AERRAARAGF SVLKIDTSQV  120
GSSTVIQSPV SIPPGLSPTI LLESPVVLYN KVARPAAYLT VSAHGGASIL KSQAAVDVSS  180
TLSIEEEERA THGTVSEDCD GDEDETESKR RKMDSLGAAT ITSAATTSAV DMGAVASRSV  240
RQPRVVVQTT SEVDILDDGY RWRKYGQKVV KGNPNP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802032.17e-69LOW QUALITY PROTEIN: probable WRKY transcription factor 2
TrEMBLA0A3L6T8Q04e-68A0A3L6T8Q0_PANMI; Putative WRKY transcription factor 2
STRINGSi029342m4e-66(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123382233