PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02112.1.g00220.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 865aa MW: 93408.1 Da PI: 10.3184

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02112.1.g00220.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.1	1.4e-36	493	547	5	59
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 l+cprC s+ntkfCy+nny+++qPr+fCk C+ryWt+GGalrnvPvG+grrkn+ Zmw_sc02112.1.g00220.1.am.mk 493 PLPCPRCRSRNTKFCYFNNYNVNQPRHFCKDCHRYWTAGGALRNVPVGAGRRKNR 547 679**************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	7.1E-30	494	547	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.733	494	548	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	496	532	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	4.0E-19	503	547	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 865 aa Download sequence Send to blast
MSTAAPALLL YSNEAISLSR RRKVNSTPVG SDFRSKLSTP SPCTPEEIAS PALSIPTASS 60 GESYRRQSSW PSLMWRIAAC LVVHRTNALA CLPPCRRESM LHSLFRAEKE LGRSLFKLPS 120 PSTVPGMEPG WSHSGLELLT NPSLGSFSVA YDQIQDEATY SYSGVTMVLL SWPWLRKSLP 180 DEYAEAGLHG LLPPSIPLGA TRKYEAATGV ADHATLGRRA PIPSLFRNSK ETTQPCYQVH 240 SLPNLLAAGM DTASQQCLYK NGEILLESQT PHAPPPSSSS TSARQPSPAI TITLNKLVLL 300 GRRREGTGRV SCPTPSAGDA PFCRFLAFFP RPNPSFLSAP AHLAGGPLLL ASWLLLVRHR 360 PPRFVVWMLS HVEMARGACG IKLFGKVITP CAAPAPSQED PASRAAFVRE RPADPDESEQ 420 PTVKREAACA DHDFEKHQQH GGAESGESKA AGGHPRSRQQ DTAEARAAXX XXRSRQQDTA 480 EARAAAAASS APPLPCPRCR SRNTKFCYFN NYNVNQPRHF CKDCHRYWTA GGALRNVPVG 540 AGRRKNRPLG PVVAAHHANH HQLQLHHHHH PAAAAAGLVL GFPGDPSSPA SPVYADRWPV 600 CPDRRCGSPE CQRDPMPARR HSRIYFDCAV PTSMTVGKKR LATWAREHFQ FLSGGAAARA 660 SAFGPDFTAA GQPGAIVVGS CAAGAGREGT FWLCCLLDWT GRREQAARKL CHGSDLLLAG 720 ITLAASQQPG GSWSSQKAGK AHESVGMTWT GSSSPSKSNR LIRHQKLVRE TGRAVAPGGV 780 NFIAKTRWFV PRRYRCTLST RAVASVVALA VPSHSRPAAF PQKRRKRTGG TTRSLASAEL 840 QAPVESINPD GAWKHGTRHG TSYCA

Sequence ? help Back to Top

Protein Sequence Length: 865 aa Download sequence Send to blast

MSTAAPALLL YSNEAISLSR RRKVNSTPVG SDFRSKLSTP SPCTPEEIAS PALSIPTASS  60
GESYRRQSSW PSLMWRIAAC LVVHRTNALA CLPPCRRESM LHSLFRAEKE LGRSLFKLPS  120
PSTVPGMEPG WSHSGLELLT NPSLGSFSVA YDQIQDEATY SYSGVTMVLL SWPWLRKSLP  180
DEYAEAGLHG LLPPSIPLGA TRKYEAATGV ADHATLGRRA PIPSLFRNSK ETTQPCYQVH  240
SLPNLLAAGM DTASQQCLYK NGEILLESQT PHAPPPSSSS TSARQPSPAI TITLNKLVLL  300
GRRREGTGRV SCPTPSAGDA PFCRFLAFFP RPNPSFLSAP AHLAGGPLLL ASWLLLVRHR  360
PPRFVVWMLS HVEMARGACG IKLFGKVITP CAAPAPSQED PASRAAFVRE RPADPDESEQ  420
PTVKREAACA DHDFEKHQQH GGAESGESKA AGGHPRSRQQ DTAEARAAXX XXRSRQQDTA  480
EARAAAAASS APPLPCPRCR SRNTKFCYFN NYNVNQPRHF CKDCHRYWTA GGALRNVPVG  540
AGRRKNRPLG PVVAAHHANH HQLQLHHHHH PAAAAAGLVL GFPGDPSSPA SPVYADRWPV  600
CPDRRCGSPE CQRDPMPARR HSRIYFDCAV PTSMTVGKKR LATWAREHFQ FLSGGAAARA  660
SAFGPDFTAA GQPGAIVVGS CAAGAGREGT FWLCCLLDWT GRREQAARKL CHGSDLLLAG  720
ITLAASQQPG GSWSSQKAGK AHESVGMTWT GSSSPSKSNR LIRHQKLVRE TGRAVAPGGV  780
NFIAKTRWFV PRRYRCTLST RAVASVVALA VPSHSRPAAF PQKRRKRTGG TTRSLASAEL  840
QAPVESINPD GAWKHGTRHG TSYCA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6495	28	51