PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02164.1.g00050.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 225aa    MW: 23426 Da    PI: 6.5041
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02164.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-182675255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Zmw_sc02164.1.g00050.1.am.mk 26 QYKGVRMRS-WGSWVSEIRAP---NQKRRIWLGSYATPEAAARAYDAALLCLKG 75
                                  6*****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-292585IPR001471AP2/ERF domain
PROSITE profilePS5103222.1422683IPR001471AP2/ERF domain
SMARTSM003802.5E-342689IPR001471AP2/ERF domain
PfamPF008471.1E-112675IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-202684IPR016177DNA-binding domain
CDDcd000182.15E-182685No hitNo description
PRINTSPR003674.9E-82738IPR001471AP2/ERF domain
PRINTSPR003674.9E-84965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MVKTPSNPAA TAFTEGACRG KAAARQYKGV RMRSWGSWVS EIRAPNQKRR IWLGSYATPE  60
AAARAYDAAL LCLKGADAVL NFPSSSPSRN VAGGDRGHLD LAAGSVPPRS IQRAAAAAAA  120
AFDTCTSVDA SGDDRCSSSA GASATATTSA SLSPTPRRDD HTTPSSSAAA STGSSAQGEE  180
MWTDLLDVLA SPKCVDLMAA RAAPFSSTWE EPEDDGEMMR LWSFC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002465511.12e-68ethylene-responsive transcription factor ERF014
TrEMBLA0A3L6TSU05e-68A0A3L6TSU0_PANMI; Uncharacterized protein
STRINGSb01g040280.16e-68(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108303040