PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02192.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 256aa    MW: 27460.1 Da    PI: 8.6145
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02192.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS52.11.3e-1611620487172
                          GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetge 163
                                    sP+++++  +aN aI+eav  ++++H +Dfd+s + Q +aL q La+ + +  sl++T++ +p+s     ++ +l ++ge
  Zmw_sc02192.1.g00040.1.am.mk 116 GSPCFRLALHAANIAIVEAVGDHRAIHLVDFDVSAP-QHAALVQYLADCRVPGTSLKVTTITDPSSPfaqsQTATLPAVGE 195
                                   59*******************************987.99********999999**********998889989999****** PP

                          GRAS 164 rLakfAeel 172
                                   rL+k+ +++
  Zmw_sc02192.1.g00040.1.am.mk 196 RLKKLVDRV 204
                                   ***998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS509858.691256IPR005202Transcription factor GRAS
PfamPF035144.5E-14116204IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MLIPLTLQQH EGTQTHQTRF GLIATTHPGT RVSSHGVVTC PPPPSSLAVA QPPRLSPVHS  60
CRESTPLATH PDSCTPVFQP PTASPPWSHL CGHAWRWPAR GEQRWPGGAD CSGVDGSPCF  120
RLALHAANIA IVEAVGDHRA IHLVDFDVSA PQHAALVQYL ADCRVPGTSL KVTTITDPSS  180
PFAQSQTATL PAVGERLKKL VDRVGNAGLD DGGSQGRGRR ELLQHPCSAQ SQKGNRRQRQ  240
VVAVPFFFFL IVGKTD
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2841523