PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02218.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

FAR1

Protein Properties

Length: 217aa MW: 24061.2 Da PI: 8.3889

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02218.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.3	1e-07	66	131	1	76
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkw 76 ++Yn ++ e GF +r s+s+++ r++ + ++++vC +g + + + + r+gCk ++++++++d+ w Zmw_sc02218.1.g00070.1.sm.mk 66 NYYNLHSWEKGFGIRCSSSETN-RQQYVNMKELVCMYQGWPGANIRG---------SMRCGCKSRMVLRRTDDHGW 131 69**************9998.6666*********9998766.........99**********998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MVNHTTKVRP DAERQRGTCG PSERKPIVGR LTALEQALLD YKKKPGGCVI TPKEGVAFDS 60 YNEAFNYYNL HSWEKGFGIR CSSSETNRQQ YVNMKELVCM YQGWPGANIR GSMRCGCKSR 120 MVLRRTDDHG WLKPLCGAIA REVATDDIET NLYECSVGSV SSASLEPTRA EVMTAQGDDH 180 SFGRRWPSTT VPPWQIGATP LPPLGGGSGD IRYPHFS

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP619	19	91