PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02252.1.g00150.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 242aa    MW: 26198.3 Da    PI: 11.2432
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02252.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.71.5e-107597123
                                  ---SS-EEEEEEE--TT-SS-EE CS
                          WRKY  1 ldDgynWrKYGqKevkgsefprs 23
                                  ldDg++WrKYGqK++ g+++prs
  Zmw_sc02252.1.g00150.1.am.mk 75 LDDGFSWRKYGQKDILGAKYPRS 97
                                  59********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-96297IPR003657WRKY domain
SuperFamilySSF1182904.58E-86997IPR003657WRKY domain
PROSITE profilePS5081110.8270136IPR003657WRKY domain
SMARTSM007741.2E-575111IPR003657WRKY domain
PfamPF031061.9E-77698IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MNRQDLPPAA REICGELASR VERSLHVARS WVPPGYADGS TGGSAAKDAQ FKRRKGMPCV  60
RSQVRVASLH DTAALDDGFS WRKYGQKDIL GAKYPRSALD HQRPHVTNHS GAGNGRYWVI  120
GRVNRTKRTA VTAASATTPP SRRRRHAHPP AAASTEATPP PPPRATARLL PERSKSSSTA  180
SAMRSKRSAV SSARSMAVGD LDATECGPLS PTKSSDGEFF ERYKLRDSDL SSKGSNGWVP  240
ER
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183