PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02266.1.g00170.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 497aa MW: 53810.7 Da PI: 4.5089

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02266.1.g00170.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.3	1.6e-49	17	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkya........ 69 l+pGfrFhPtdeelv++yL+++++g++l++ ++i+evd+y++ePwdLp +++++++ +wyfF++ d+k + Zmw_sc02266.1.g00170.1.am.mkhc 17 LAPGFRFHPTDEELVSYYLRRRIAGRRLRV-DAIAEVDLYRLEPWDLPslSRIRSRDAQWYFFARLDRKITgagaggrg 94 579*************************.99***********5448999999*******9977777766 PP NAM 70 .tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g+r+nrat +gyWk+tgkd+ev++ +g+ vg+kktLvf++grapkg +t+Wvmheyrl Zmw_sc02266.1.g00170.1.am.mkhc 95 gPGNRTNRATPQGYWKTTGKDREVFH-RGKPVGMKKTLVFHNGRAPKGARTNWVMHEYRL 153 5567******************.999**************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	6.02E-52	14	159	IPR003441	NAC domain
PROSITE profile	PS51005	50.366	17	173	IPR003441	NAC domain
Pfam	PF02365	4.3E-27	19	153	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence Send to blast
MSNQSPLDSS PPAEVPLAPG FRFHPTDEEL VSYYLRRRIA GRRLRVDAIA EVDLYRLEPW 60 DLPSLSRIRS RDAQWYFFAR LDRKITGAGA GGRGGPGNRT NRATPQGYWK TTGKDREVFH 120 RGKPVGMKKT LVFHNGRAPK GARTNWVMHE YRLLDADGPQ NGAQYGAPYM EEEWEEDDDA 180 IEKGAIIGAS TKVAATSDTA DEELNEEEEN GDCKTSELAQ ADEILNLPVV AAPQAQGLNE 240 TSDGSCADGA IFLEEILSST VNVENITGPD GQNGTDDNFS VADFSGCLTK DDGYIENDFK 300 YDKLGSGEGS DYQLPEMSNF AQKGDYNDES ACDGISKTSI ANGQYGASSS GSHDDLYPYD 360 AVPVDGTAGK TFGKHLVNLL DSIPTKTALA EENPPATRKS VLNAVSPSSI RVTAGIIQLG 420 GLNFTASEHG PLQKNGDFSL LLSFAMDGDV ASKSVSFEPA TRVGAVPMVM RSGLYLFFVS 480 AMILMLSYKV GLCIYSR

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence Send to blast

MSNQSPLDSS PPAEVPLAPG FRFHPTDEEL VSYYLRRRIA GRRLRVDAIA EVDLYRLEPW  60
DLPSLSRIRS RDAQWYFFAR LDRKITGAGA GGRGGPGNRT NRATPQGYWK TTGKDREVFH  120
RGKPVGMKKT LVFHNGRAPK GARTNWVMHE YRLLDADGPQ NGAQYGAPYM EEEWEEDDDA  180
IEKGAIIGAS TKVAATSDTA DEELNEEEEN GDCKTSELAQ ADEILNLPVV AAPQAQGLNE  240
TSDGSCADGA IFLEEILSST VNVENITGPD GQNGTDDNFS VADFSGCLTK DDGYIENDFK  300
YDKLGSGEGS DYQLPEMSNF AQKGDYNDES ACDGISKTSI ANGQYGASSS GSHDDLYPYD  360
AVPVDGTAGK TFGKHLVNLL DSIPTKTALA EENPPATRKS VLNAVSPSSI RVTAGIIQLG  420
GLNFTASEHG PLQKNGDFSL LLSFAMDGDV ASKSVSFEPA TRVGAVPMVM RSGLYLFFVS  480
AMILMLSYKV GLCIYSR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-42	13	153	11	140	Stress-induced transcription factor NAC1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008677410.1	1e-176	NAC domain-containing protein 78 isoform X1
TrEMBL	A0A0E0NN05	1e-165	A0A0E0NN05_ORYRU; Uncharacterized protein
STRING	BRADI3G56080.1	1e-118	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP73518	2	2