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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zmw_sc02302.1.g00050.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
NAC |
| Protein Properties |
Length: 356aa MW: 38825.7 Da PI: 7.2327 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc02302.1.g00050.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168.6 | 2e-52 | 16 | 150 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
lppGfrFhPtdee+v+ yL +k + +++ ++i+ev+++k+eP+dLp+k+k +ekewyfF+++d ky+tg r+nratk
Zmw_sc02302.1.g00050.1.am.mkhc 16 LPPGFRFHPTDEEVVTSYLLRKFLNPSFDP-RAIAEVNLNKCEPRDLPSKAKMGEKEWYFFCHKDMKYPTGVRTNRATK 93
79*************************999.88***************99999************************** PP
NAM 80 sgyWkatgkdkevlsk.......kgelvglkktLvfykgrapkgektdWvmheyrle 129
+gyWkatgkd+e+++ ++elvg+kktLvfy+grap+g+kt+Wvmhe+rle
Zmw_sc02302.1.g00050.1.am.mkhc 94 EGYWKATGKDREIFKPvsdggggRRELVGMKKTLVFYTGRAPRGSKTNWVMHEFRLE 150
***************999999888888***************************985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MVERGVVKQE QGDLFLPPGF RFHPTDEEVV TSYLLRKFLN PSFDPRAIAE VNLNKCEPRD 60
LPSKAKMGEK EWYFFCHKDM KYPTGVRTNR ATKEGYWKAT GKDREIFKPV SDGGGGRREL 120
VGMKKTLVFY TGRAPRGSKT NWVMHEFRLE GKYRDTANPV HLTPKDEWVV CKVFHKSNGE 180
DNKKANAAAA AAAGAGDGGD DVLVDSTIDP VCFEYSTSSL LDTTTTTTTM DVTAMAPYDA 240
AAMLTNVVGS FVDDLPNYTL ISDTTSSSRR NLHQHQTTTV AGSTAVPASS GYSSPWTTNT 300
LRPEYSYLAM GSYDLLDQAM TAKALGLGGV VSPAVAGGLP SYPVAGTLQQ SSLGHY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-48 | 13 | 178 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-48 | 13 | 178 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-48 | 13 | 178 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-48 | 13 | 178 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 3swm_B | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 3swm_C | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 3swm_D | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 3swp_A | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 3swp_B | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 3swp_C | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 3swp_D | 1e-48 | 13 | 178 | 17 | 170 | NAC domain-containing protein 19 |
| 4dul_A | 1e-48 | 13 | 178 | 14 | 167 | NAC domain-containing protein 19 |
| 4dul_B | 1e-48 | 13 | 178 | 14 | 167 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in stress response (By similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters in vitro (PubMed:18813954). {ECO:0000250|UniProtKB:Q7F2L3, ECO:0000269|PubMed:18813954}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}. |
