PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02405.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family FAR1
Protein Properties Length: 68aa    MW: 7701.59 Da    PI: 10.5159
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02405.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.51.4e-10663165
                          FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkak 65
                                  +fY++Y++ +GF+++k++s++    g    +++ Cs +g+++++ +   +++r ++++r gCka+
  Zmw_sc02405.1.g00040.1.sm.mk  6 NFYKTYSELAGFNIKKNRSRNG---G--RGQDYECSSSGNNRKSPSV--NHKRGKTTKRKGCKAM 63
                                  6**************9987766...3..567**********998876..999999*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.0E-7663IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
MDDVFNFYKT YSELAGFNIK KNRSRNGGRG QDYECSSSGN NRKSPSVNHK RGKTTKRKGC  60
KAMGISEY