PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02489.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 217aa MW: 23615.8 Da PI: 8.4918

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02489.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.1	3.3e-12	32	55	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 prlrWt +LHerFv+av+qLGG+e Zmw_sc02489.1.g00050.1.sm.mk 32 PRLRWTADLHERFVDAVAQLGGPE 55 8*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.3E-10	32	67	IPR009057	Homeodomain-like
Pfam	PF14379	3.6E-20	93	138	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MFPPGLIHHR PDGPAPSDAP PRAGPGGGPS LPRLRWTADL HERFVDAVAQ LGGPEIYPVE 60 LLSCGLKALK YRLGKQSGKE GSEQSKDGKL SQEVKEALRA QMEVQRRLHE QVEVQKRVQI 120 RMDALQKYID AILENACKLV TEQFASSGFS ISDPDLPDLS SGGVICGPND TLRSSVFNQV 180 SVSSIDSHSR GDKPSRSGVE GPPLHLQKPP ELKRRSS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269\|PubMed:26586833}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated in roots by low Pi. {ECO:0000269\|PubMed:26586833}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004956514.1	1e-108	protein PHR1-LIKE 2 isoform X1
Swissprot	Q94A57	1e-34	PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBL	A0A368Q049	1e-107	A0A368Q049_SETIT; Uncharacterized protein
TrEMBL	K3ZV10	1e-107	K3ZV10_SETIT; Uncharacterized protein
STRING	Si030441m	1e-107	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3427	38	73

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]