PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02510.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 361aa MW: 40011.3 Da PI: 10.082

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02510.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	34.5	5.6e-11	30	116	4	97
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfs 81 r ws+eD i +L ++ +++g p+ d f v++s++ + + +l e++rrLK+++++ v++ + s Zmw_sc02510.1.g00110.1.es.mkhc 30 LRAWSKEDSIKILEAIAAHVKSEGRLPKTD---FLAAVRDSLDrKDCNYADLYERVRRLKERYEETVSN-----GVLPS 100 589*******************888876...7888899997257999***************9.....44456 PP DUF573 82 kehdqkifelskkiWg 97 +e++ ++++ls+ iWg Zmw_sc02510.1.g00110.1.es.mkhc 101 EEDELHMYNLSEAIWG 116 667779*******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.3E-15	31	116	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence Send to blast
KAKKPRVKPE KSGLNSPPPS SKSEKSARAL RAWSKEDSIK ILEAIAAHVK SEGRLPKTDF 60 LAAVRDSLDR KDCNYADLYE RVRRLKERYE ETVSNGVLPS EEDELHMYNL SEAIWGDKAK 120 EAITAAAALQ NGSTAMKSKK GEANKEKMDG SSKGGTSKEV VNQNGDTRKV GKKGQAINGK 180 ADMDVKRKMS KEDSATGTLT KTKKQGNERE ELGENVKSGT SKETVATVTK NGDTLRKPKR 240 QKMDIDHMPK VASTGRQNGG SQTEDVTHHE EKEIGATLQG MHRSFDELRN LYPSLAWSVE 300 RMAAQHPCGE SLKRAFELIH DEKANVLESK MKKQIISEVK VQVRRVDVSK EVLNMLISPA 360 D

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence Send to blast

KAKKPRVKPE KSGLNSPPPS SKSEKSARAL RAWSKEDSIK ILEAIAAHVK SEGRLPKTDF  60
LAAVRDSLDR KDCNYADLYE RVRRLKERYE ETVSNGVLPS EEDELHMYNL SEAIWGDKAK  120
EAITAAAALQ NGSTAMKSKK GEANKEKMDG SSKGGTSKEV VNQNGDTRKV GKKGQAINGK  180
ADMDVKRKMS KEDSATGTLT KTKKQGNERE ELGENVKSGT SKETVATVTK NGDTLRKPKR  240
QKMDIDHMPK VASTGRQNGG SQTEDVTHHE EKEIGATLQG MHRSFDELRN LYPSLAWSVE  300
RMAAQHPCGE SLKRAFELIH DEKANVLESK MKKQIISEVK VQVRRVDVSK EVLNMLISPA  360
D

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824313.1	1e-115	recombination repair protein 1-like
TrEMBL	A0A0A9QY26	1e-119	A0A0A9QY26_ARUDO; Uncharacterized protein
STRING	Pavir.Ab01142.1.p	1e-112	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7289	27	37