PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02510.1.g00130.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 183aa    MW: 20266.8 Da    PI: 6.1164
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02510.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.88.3e-10121272127
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                                   ppG+ F+Ptdeel+ + L ++  gk+  +  +i e   +k+ P  L      +++   f+++ ++     +r++r    g 
  Zmw_sc02510.1.g00130.1.sm.mk  12 PPGLIFDPTDEELIEHCLLPRSLGKPEAFPGIIVED--NKTTP--LI-----DDQLPAFYVRDERPD--ARRSRRCDGGGW 81 
                                   8*************************7776665443..45555..32.....233336888887755..5799999999** PP

                           NAM  83 Wkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                   Wk + +    d++vl   ++e+ ++++   f+  +     +  Wvm ey 
  Zmw_sc02510.1.g00130.1.sm.mk  82 WKIQKSdskdDRHVLIVdGREVRWTRNNRNFHLDSG----SVGWVMYEYF 127
                                   *97766222345555545777789999999994333....568******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-1610133IPR003441NAC domain
PROSITE profilePS5100513.27711156IPR003441NAC domain
PfamPF023651.9E-1112126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MSPAKFLGDD HPPGLIFDPT DEELIEHCLL PRSLGKPEAF PGIIVEDNKT TPLIDDQLPA  60
FYVRDERPDA RRSRRCDGGG WWKIQKSDSK DDRHVLIVDG REVRWTRNNR NFHLDSGSVG  120
WVMYEYFIDD SRRSRFAGSP PATAKSGLAS STATTTVPSP VNPLLSAGAS PTQPAAVLLI  180
QLL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP8717946