PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02584.1.g00140.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 371aa    MW: 41400.4 Da    PI: 4.778
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02584.1.g00140.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM447.1e-14421722126
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleev.ikevd.iykvePwdLpkkvka..eekewyfFskrdkkya...tgk 72 
                                    +G+rF+Pt  e+v+++L + ++g+    +++ +  i++++ +y+ eP dL  +++    +++ +fF++  ++++   ++ 
  Zmw_sc02584.1.g00140.1.am.mk  42 HQGYRFQPTPREVVSRHLPRLIAGELslmHDAIRPyIHDTNvVYDREPDDLAGMFQPtpATDDRFFFTTVVRQKHrpgSSV 122
                                   68*********************99966533333349999637888*****853333225557899988776666233455 PP

                           NAM  73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126
                                   r  r++  g W  + +   + ++++ ++g  + L +     ++g  tdW+m+e 
  Zmw_sc02584.1.g00140.1.am.mk 123 RYVRVAGPGSWALQRSMDVLDEAGTVKIGELRRLRYK----KNGAYTDWLMEEC 172
                                   8888999****9998866666668999********97....78999******95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-1736196IPR003441NAC domain
PROSITE profilePS5100520.19141196IPR003441NAC domain
PfamPF023653.1E-843171IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MRAREEDEAA ARGDRRGKRR LRLASLARIE TPPPIKEESA LHQGYRFQPT PREVVSRHLP  60
RLIAGELSLM HDAIRPYIHD TNVVYDREPD DLAGMFQPTP ATDDRFFFTT VVRQKHRPGS  120
SVRYVRVAGP GSWALQRSMD VLDEAGTVKI GELRRLRYKK NGAYTDWLME ECSCACSVKD  180
AVDGDNERVF CRIYVSPNAA NNNKKRPLPL SLKSPSPKRI QRAPVAPIGP IPPAGCTTKS  240
TLLSPHRPAA GPSAPAPPAD QAPHPYTPRA APVSRLPVPF VSPDPLQSTE DAVDDDFDEL  300
FDKLDTMLAC EPAGDEETTA DPDDSVETDD ELVNIIETTL VTTTEDEDED EDDDDDDWMR  360
PFLKRVRCQL P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012703694.13e-46uncharacterized protein LOC101768364
TrEMBLA0A368S8U72e-44A0A368S8U7_SETIT; Uncharacterized protein
STRINGSi011838m4e-45(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799