PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02627.1.g00120.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 365aa MW: 40427.1 Da PI: 10.3849

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02627.1.g00120.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	62.2	8.9e-20	103	144	9	50
RWP-RK 9 dlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +++++F+l ikdAA eLg+c++++K iCR++G++RWP Rk++ Zmw_sc02627.1.g00120.1.am.mk 103 EIRACFHLRIKDAAAELGICQSTIKGICRKHGVPRWPGRKVR 144 799*************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.345	82	166	IPR003035	RWP-RK domain
Pfam	PF02042	1.9E-17	103	144	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence Send to blast
MAAGFVGGLA AGVDGGCWGV AAACMCWWQM GVLVVTVGGE CDLKSSRHLH FIYTDSTCRC 60 TKSPTREEKK DLMKHLLVAV DSDQLAMAPG GKKRTMDEPE WPEIRACFHL RIKDAAAELG 120 ICQSTIKGIC RKHGVPRWPG RKVRFMLGQL GKLAIEARAR QGAAPGEEGG HRRREMIAMD 180 ISKVLEEVAR VLQLLPSSDA NPTTKIILTA EDRDCGSVLF KGLQDWRRWS VTWPPPSTEK 240 KATLVLVVFT MPRRRAASPP WSEVLGVLHL RLNDAAAALG ISTDRLKFVR SLNAKLRRLI 300 QVAAVAKADA LPWWQAPHRR RLGTITREAR RVIHDLDGIY ERFRNLAPLP QRASDGTLNL 360 IDNVG

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence Send to blast

MAAGFVGGLA AGVDGGCWGV AAACMCWWQM GVLVVTVGGE CDLKSSRHLH FIYTDSTCRC  60
TKSPTREEKK DLMKHLLVAV DSDQLAMAPG GKKRTMDEPE WPEIRACFHL RIKDAAAELG  120
ICQSTIKGIC RKHGVPRWPG RKVRFMLGQL GKLAIEARAR QGAAPGEEGG HRRREMIAMD  180
ISKVLEEVAR VLQLLPSSDA NPTTKIILTA EDRDCGSVLF KGLQDWRRWS VTWPPPSTEK  240
KATLVLVVFT MPRRRAASPP WSEVLGVLHL RLNDAAAALG ISTDRLKFVR SLNAKLRRLI  300
QVAAVAKADA LPWWQAPHRR RLGTITREAR RVIHDLDGIY ERFRNLAPLP QRASDGTLNL  360
IDNVG

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP47124	3	3